CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY61301	Canola	extracellular	96.19	96.19
CDY15628	Canola	extracellular	85.71	92.78
CDY61300	Canola	extracellular	84.76	91.75
CDY26874	Canola	extracellular	76.19	82.47
CDX95131	Canola	extracellular	58.1	61.62
CDX93626	Canola	extracellular	57.14	60.61
CDY40472	Canola	extracellular	55.24	59.79
AT2G14846.1	Thale cress	extracellular	56.19	59.6
CDY12874	Canola	extracellular	54.29	58.76
CDX93624	Canola	extracellular	55.24	58.59
AT3G57310.1	Thale cress	extracellular	55.24	56.31
CDX95132	Canola	extracellular	47.62	50.51
AT1G07747.1	Thale cress	extracellular	44.76	49.47
CDY50600	Canola	extracellular	45.71	48.98
CDY12591	Canola	extracellular	44.76	47.96
CDY52889	Canola	extracellular	43.81	47.92
HORVU0Hr1G001480.2	Barley	cytosol	21.9	47.92
AT1G43667.1	Thale cress	extracellular	42.86	45.92
CDX77289	Canola	extracellular	40.95	44.33
CDY68337	Canola	extracellular	40.0	43.3
CDY32103	Canola	extracellular	40.0	43.3
CDY40833	Canola	extracellular	40.0	43.3
AT4G12825.1	Thale cress	extracellular	39.05	43.16
AT1G43666.1	Thale cress	extracellular	39.05	42.71
CDY16462	Canola	extracellular	39.05	42.27
CDY04317	Canola	extracellular	39.05	42.27
GSMUA_Achr9P18720_001	Banana	extracellular	35.24	40.66
TraesCS1D01G381200.1	Wheat	extracellular	37.14	39.8
CDY48021	Canola	endoplasmic reticulum, extracellular, plasma membrane	36.19	39.58
CDY51937	Canola	extracellular	36.19	39.58
CDX95546	Canola	endoplasmic reticulum, extracellular, plasma membrane	36.19	39.58
CDY24453	Canola	extracellular	36.19	39.58
CDX75963	Canola	extracellular	36.19	39.58
GSMUA_Achr2P06400_001	Banana	extracellular	34.29	39.56
TraesCS1D01G381300.1	Wheat	extracellular	36.19	38.78
CDY04056	Canola	extracellular	37.14	38.61
CDX92224	Canola	extracellular	35.24	38.54
Os05t0550600-02	Rice	extracellular	35.24	38.54
TraesCS1B01G394700.1	Wheat	extracellular	35.24	38.14
TraesCS1D01G381600.1	Wheat	extracellular	35.24	37.76
TraesCS1A01G374500.1	Wheat	extracellular	33.33	36.08
CDY01688	Canola	plastid	44.76	35.61
Os05t0550300-01	Rice	extracellular	31.43	35.11
TraesCS1A01G374400.1	Wheat	extracellular	32.38	34.69
Zm00001d037677_P001	Maize	endoplasmic reticulum, plasma membrane	32.38	33.66
CDY70822	Canola	extracellular	32.38	33.33
GSMUA_Achr9P21450_001	Banana	endoplasmic reticulum, plasma membrane, plastid	34.29	33.33
EES18625	Sorghum	extracellular	30.48	32.99
Zm00001d038913_P001	Maize	endoplasmic reticulum, extracellular	30.48	32.65
TraesCS3D01G261600.1	Wheat	extracellular	29.52	32.63
AT1G43665.1	Thale cress	extracellular	38.1	32.52
TraesCS1A01G374200.1	Wheat	extracellular	29.52	32.29
TraesCS1D01G380800.1	Wheat	extracellular	29.52	32.29
HORVU1Hr1G083170.1	Barley	extracellular	29.52	32.29
TraesCS1B01G394500.1	Wheat	extracellular	29.52	32.29
TraesCS1B01G394100.1	Wheat	extracellular	29.52	32.29
TraesCS1B01G394400.1	Wheat	extracellular	29.52	32.29
EES18626	Sorghum	extracellular	31.43	31.73
TraesCS3A01G261600.1	Wheat	extracellular	28.57	31.58
HORVU1Hr1G083160.1	Barley	extracellular	28.57	31.25
TraesCS1A01G374300.1	Wheat	extracellular	28.57	31.25
TraesCS1D01G381100.1	Wheat	extracellular	28.57	31.25
CDY60143	Canola	extracellular	28.57	30.93
HORVU1Hr1G083210.1	Barley	plastid	36.19	30.65
CDY47738	Canola	extracellular	28.57	30.61
CDY45874	Canola	extracellular	28.57	30.61
HORVU1Hr1G083180.1	Barley	endoplasmic reticulum, extracellular	35.24	30.08
Zm00001d038911_P001	Maize	extracellular	28.57	29.7
TraesCS3B01G294800.1	Wheat	extracellular	26.67	29.17
Os01t0691100-01	Rice	endoplasmic reticulum, extracellular, mitochondrion	30.48	25.81
TraesCS1B01G394600.1	Wheat	plastid	34.29	25.0
CDY44406	Canola	extracellular	34.29	19.46

Protein Annotations

EnsemblPlants:CDY15627	EnsemblPlantsGene:GSBRNA2T00089817001	Gene3D:1.10.110.10	GO:GO:0006810	GO:GO:0006869	GO:GO:0008150
InterPro:Bifun_inhib/LTP/seed_sf	InterPro:Bifunc_inhib/LTP/seed_store	InterPro:nsLTP2	PANTHER:PTHR33214	PANTHER:PTHR33214:SF7	PFAM:PF14368
ProteinID:CDY15627	ProteinID:CDY15627.1	SignalP:SignalP-TM	SMART:SM00499	SUPFAM:SSF47699	TMHMM:TMhelix
unigene:Bna.1621	UniParc:UPI0004EF1D58	UniProt:A0A078FS03	MapMan:35.2	:	:

Description

BnaA08g29110DBnaA08g29110D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FS03]

Coordinates

chrLK032055:-:783050..783367

Molecular Weight (calculated)

11299.9 Da

IEP (calculated)

5.724

GRAVY (calculated)

0.500

Length

105 amino acids

Sequence
(BLAST)

001: MCWNPIVSMK FTGVVCIAFV IVLLSALAPT KAVFEEKVAC IPTELMTCIP ALQTGSQPSA DCCGKLKEQE SCLCGYIQNP LFSQYVTSEN AHKVLATCGI
101: SYPTC

Best Arabidopsis Sequence Match ( AT3G57310.1 )
(BLAST)

001: MKFTKLLFVA SVMIVMSPLA PTRATVVGGW GIEEKAACIV TNLMSCLPAI LKGSQPPAYC CEMLKEQQSC LCGYIKSPTF GHYVIPQNAH KLLAACGILY
101: PKC

Arabidopsis Description

Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9M2L6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.