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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 4
  • golgi 4
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular
Any Predictor:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES18626 Sorghum extracellular 78.57 74.04
TraesCS1D01G381300.1 Wheat extracellular 70.41 70.41
TraesCS1D01G381200.1 Wheat extracellular 69.39 69.39
TraesCS1D01G381600.1 Wheat extracellular 68.37 68.37
TraesCS1B01G394700.1 Wheat extracellular 67.35 68.04
TraesCS1A01G374500.1 Wheat extracellular 66.33 67.01
Os05t0550600-02 Rice extracellular 65.31 66.67
TraesCS1A01G374400.1 Wheat extracellular 64.29 64.29
HORVU1Hr1G083210.1 Barley plastid 70.41 55.65
HORVU1Hr1G083180.1 Barley endoplasmic reticulum, extracellular 66.33 52.85
Zm00001d027332_P001 Maize extracellular 47.96 47.96
Zm00001d037677_P001 Maize endoplasmic reticulum, plasma membrane 48.98 47.52
GSMUA_Achr9P18720_001 Banana extracellular 42.86 46.15
Zm00001d038911_P001 Maize extracellular 45.92 44.55
KRH01717 Soybean extracellular 41.84 43.16
GSMUA_Achr9P21450_001 Banana endoplasmic reticulum, plasma membrane, plastid 45.92 41.67
KRH70406 Soybean extracellular 39.8 41.05
GSMUA_Achr2P06400_001 Banana extracellular 37.76 40.66
Zm00001d013907_P001 Maize plastid 39.8 40.62
TraesCS1B01G394600.1 Wheat plastid 59.18 40.28
VIT_14s0006g02530.t01 Wine grape plastid 30.61 37.04
Zm00001d036452_P001 Maize extracellular 34.69 36.17
Zm00001d052759_P001 Maize extracellular 35.71 36.08
KRG93187 Soybean extracellular 35.71 36.08
Zm00001d007299_P001 Maize extracellular 35.71 35.35
AT5G38160.1 Thale cress extracellular 36.73 34.95
VIT_17s0000g03280.t01 Wine grape extracellular 32.65 34.78
Bra040627.1-P Field mustard extracellular 33.67 34.74
KRH33571 Soybean extracellular 34.69 34.0
CDY12591 Canola extracellular 33.67 33.67
CDY50600 Canola extracellular 33.67 33.67
KRH48557 Soybean extracellular 31.63 33.33
CDY52889 Canola extracellular 32.65 33.33
CDY61300 Canola extracellular 32.65 32.99
Bra028162.1-P Field mustard extracellular 33.67 32.35
KRH39147 Soybean extracellular 30.61 32.26
KRH56524 Soybean extracellular 32.65 32.0
CDY15628 Canola extracellular 31.63 31.96
Bra030699.1-P Field mustard extracellular 31.63 31.96
AT1G07747.1 Thale cress extracellular 30.61 31.58
AT1G66850.1 Thale cress extracellular 32.65 31.37
AT1G43667.1 Thale cress extracellular 30.61 30.61
CDY15627 Canola extracellular 32.65 30.48
VIT_14s0006g02550.t01 Wine grape extracellular 28.57 30.43
CDY61301 Canola extracellular 31.63 29.52
CDX93624 Canola extracellular 29.59 29.29
CDY40472 Canola extracellular 28.57 28.87
Bra008375.1-P Field mustard extracellular 28.57 28.87
CDY12874 Canola extracellular 28.57 28.87
CDY26874 Canola extracellular 28.57 28.87
AT5G38195.1 Thale cress extracellular 27.55 28.42
AT5G38170.1 Thale cress extracellular 29.59 28.16
Bra027114.1-P Field mustard extracellular 27.55 27.84
CDX93626 Canola extracellular 27.55 27.27
CDX95132 Canola extracellular 27.55 27.27
AT2G14846.1 Thale cress extracellular 27.55 27.27
AT3G57310.1 Thale cress extracellular 28.57 27.18
AT1G43666.1 Thale cress extracellular 26.53 27.08
AT5G38180.1 Thale cress extracellular 25.51 26.32
CDX95131 Canola extracellular 26.53 26.26
Bra018687.1-P Field mustard extracellular 26.53 26.26
AT4G12825.1 Thale cress extracellular 24.49 25.26
AT1G43665.1 Thale cress extracellular 31.63 25.2
CDY01688 Canola plastid 33.67 25.0
AT5G38197.1 Thale cress extracellular 23.47 23.96
Bra033084.1-P Field mustard extracellular 23.47 23.0
CDY04056 Canola extracellular 23.47 22.77
CDY70822 Canola extracellular 23.47 22.55
CDY44406 Canola extracellular 25.51 13.51
Bra033087.1-P Field mustard extracellular 25.51 12.25
Protein Annotations
Gene3D:1.10.110.10EntrezGene:100285645MapMan:35.2ProteinID:AQK88219.1UniProt:B6U7P4InterPro:Bifun_inhib/LTP/seed_sf
InterPro:Bifunc_inhib/LTP/seed_storeEMBL:EU973259GO:GO:0006810GO:GO:0006869GO:GO:0008150PFAM:PF14368
PANTHER:PTHR33214PANTHER:PTHR33214:SF5SMART:SM00499SUPFAM:SSF47699SignalP:SignalP-noTMTMHMM:TMhelix
UniParc:UPI000182F419EnsemblPlantsGene:Zm00001d038913EnsemblPlants:Zm00001d038913_P001EnsemblPlants:Zm00001d038913_T001InterPro:nsLTP2SEG:seg
Description
lipid transfer protein1 lipid transfer protein1
Coordinates
chr6:+:166868333..166868629
Molecular Weight (calculated)
10022.4 Da
IEP (calculated)
9.868
GRAVY (calculated)
0.341
Length
98 amino acids
Sequence
(BLAST)
1: MAESKARVAL FLAALAAASL LALAPAGAAT TCAPTQLTPC APAIVGNAAP TAACCARLKA HPATCFCQYK RNPSMQRYVN SPNGKKVFAA CKVSLPRC
Best Arabidopsis Sequence Match ( AT3G18280.2 )
(BLAST)
001: MSKTTTHQKH ISINSETNKR SRRNMVMIKT TMVSLFALAA VLLMILAPAA EAVTCSPMQL SPCATAITSS SPPSALCCAK LKEQRPCLCG YMRNPSLRRF
101: VSTPNARKVS KSCKLPIPRC
Arabidopsis Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LP30]
SUBAcon: [endoplasmic reticulum,plastid,extracellular,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.