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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY12591 Canola extracellular 85.42 83.67
CDY50600 Canola extracellular 85.42 83.67
AT1G66850.1 Thale cress extracellular 73.96 69.61
HORVU0Hr1G001480.2 Barley cytosol 26.04 52.08
CDY61300 Canola extracellular 45.83 45.36
CDY40472 Canola extracellular 45.83 45.36
CDY26874 Canola extracellular 45.83 45.36
CDY15628 Canola extracellular 45.83 45.36
CDY61301 Canola extracellular 47.92 43.81
CDY15627 Canola extracellular 47.92 43.81
Os05t0550300-01 Rice extracellular 42.71 43.62
CDY12874 Canola extracellular 43.75 43.3
CDX75963 Canola extracellular 42.71 42.71
CDY51937 Canola extracellular 42.71 42.71
CDX95132 Canola extracellular 43.75 42.42
CDX95131 Canola extracellular 43.75 42.42
CDX93624 Canola extracellular 43.75 42.42
GSMUA_Achr2P06400_001 Banana extracellular 39.58 41.76
TraesCS1B01G394100.1 Wheat extracellular 40.62 40.62
TraesCS1B01G394400.1 Wheat extracellular 40.62 40.62
Zm00001d037677_P001 Maize endoplasmic reticulum, plasma membrane 42.71 40.59
CDX93626 Canola extracellular 41.67 40.4
EES18625 Sorghum extracellular 40.62 40.21
CDY68337 Canola extracellular 40.62 40.21
CDY40833 Canola extracellular 40.62 40.21
CDY32103 Canola extracellular 40.62 40.21
CDY48021 Canola endoplasmic reticulum, extracellular, plasma membrane 39.58 39.58
CDX95546 Canola endoplasmic reticulum, extracellular, plasma membrane 39.58 39.58
TraesCS1A01G374300.1 Wheat extracellular 39.58 39.58
TraesCS1A01G374200.1 Wheat extracellular 39.58 39.58
CDX92224 Canola extracellular 39.58 39.58
TraesCS1B01G394500.1 Wheat extracellular 39.58 39.58
TraesCS1D01G380800.1 Wheat extracellular 39.58 39.58
TraesCS1D01G381100.1 Wheat extracellular 39.58 39.58
CDY24453 Canola extracellular 39.58 39.58
CDY04317 Canola extracellular 39.58 39.18
Zm00001d038911_P001 Maize extracellular 40.62 38.61
HORVU1Hr1G083160.1 Barley extracellular 38.54 38.54
HORVU1Hr1G083170.1 Barley extracellular 38.54 38.54
GSMUA_Achr9P18720_001 Banana extracellular 36.46 38.46
CDY16462 Canola extracellular 38.54 38.14
CDX77289 Canola extracellular 37.5 37.11
TraesCS3D01G261600.1 Wheat extracellular 36.46 36.84
TraesCS1D01G381300.1 Wheat extracellular 37.5 36.73
GSMUA_Achr9P21450_001 Banana endoplasmic reticulum, plasma membrane, plastid 40.62 36.11
TraesCS1B01G394700.1 Wheat extracellular 36.46 36.08
CDY60143 Canola extracellular 36.46 36.08
TraesCS1A01G374500.1 Wheat extracellular 36.46 36.08
TraesCS3A01G261600.1 Wheat extracellular 35.42 35.79
TraesCS1A01G374400.1 Wheat extracellular 36.46 35.71
Os05t0550600-02 Rice extracellular 35.42 35.42
CDY47738 Canola extracellular 35.42 34.69
TraesCS1D01G381200.1 Wheat extracellular 35.42 34.69
CDY45874 Canola extracellular 35.42 34.69
EES18626 Sorghum extracellular 37.5 34.62
CDY01688 Canola plastid 46.88 34.09
TraesCS1D01G381600.1 Wheat extracellular 34.38 33.67
TraesCS3B01G294800.1 Wheat extracellular 33.33 33.33
CDY70822 Canola extracellular 35.42 33.33
Os01t0691100-01 Rice endoplasmic reticulum, extracellular, mitochondrion 42.71 33.06
CDY04056 Canola extracellular 34.38 32.67
Zm00001d038913_P001 Maize endoplasmic reticulum, extracellular 33.33 32.65
HORVU1Hr1G083210.1 Barley plastid 37.5 29.03
HORVU1Hr1G083180.1 Barley endoplasmic reticulum, extracellular 36.46 28.46
TraesCS1B01G394600.1 Wheat plastid 32.29 21.53
CDY44406 Canola extracellular 40.62 21.08
Protein Annotations
EnsemblPlants:CDY52889EnsemblPlantsGene:GSBRNA2T00008051001Gene3D:1.10.110.10GO:GO:0006810GO:GO:0006869GO:GO:0008150
InterPro:Bifun_inhib/LTP/seed_sfInterPro:Bifunc_inhib/LTP/seed_storeInterPro:nsLTP2PANTHER:PTHR33214PFAM:PF14368ProteinID:CDY52889
ProteinID:CDY52889.1SignalP:SignalP-noTMSMART:SM00499SUPFAM:SSF47699UniParc:UPI0004EF01A5UniProt:A0A078ITV8
MapMan:35.2:::::
Description
BnaC06g27820DBnaC06g27820D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ITV8]
Coordinates
chrLK033139:+:27135..27484
Molecular Weight (calculated)
9925.3 Da
IEP (calculated)
8.201
GRAVY (calculated)
0.429
Length
96 amino acids
Sequence
(BLAST)
1: MMKILALTLM VFVILSPSFA APTEVALGAA CDAKQLQPCL AAITGGGQPS GDCCAKLKEQ QPCLCGFAKN PAFAQYISSP NSRKVLSACG IPYPSC
Best Arabidopsis Sequence Match ( AT1G66850.1 )
(BLAST)
001: MKIVTLVLVV FVILSTSFPA AIKAEDTGDT GNVGVTCDAR QLQPCLAAIT GGGQPSGACC AKLTEQQSCL CGFAKNPAFA QYISSPNARK VLLACNVAYP
101: TC
Arabidopsis Description
At1g66850 [Source:UniProtKB/TrEMBL;Acc:Q9C9N7]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.