Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY16462 | Canola | extracellular | 94.85 | 94.85 |
| CDY04317 | Canola | extracellular | 77.32 | 77.32 |
| CDY68337 | Canola | extracellular | 75.26 | 75.26 |
| CDY40833 | Canola | extracellular | 75.26 | 75.26 |
| CDY32103 | Canola | extracellular | 75.26 | 75.26 |
| AT1G48750.1 | Thale cress | extracellular | 68.04 | 70.21 |
| CDX75963 | Canola | extracellular | 58.76 | 59.38 |
| CDY51937 | Canola | extracellular | 58.76 | 59.38 |
| PGSC0003DMT400056028 | Potato | extracellular | 55.67 | 58.7 |
| VIT_14s0006g02530.t01 | Wine grape | plastid | 47.42 | 56.79 |
| KRH01717 | Soybean | extracellular | 54.64 | 55.79 |
| CDX92224 | Canola | extracellular | 54.64 | 55.21 |
| CDX95546 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 53.61 | 54.17 |
| CDY48021 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 53.61 | 54.17 |
| CDY24453 | Canola | extracellular | 53.61 | 54.17 |
| VIT_14s0006g02550.t01 | Wine grape | extracellular | 49.48 | 52.17 |
| KRH70406 | Soybean | extracellular | 47.42 | 48.42 |
| CDY15628 | Canola | extracellular | 43.3 | 43.3 |
| CDY61300 | Canola | extracellular | 43.3 | 43.3 |
| PGSC0003DMT400067824 | Potato | extracellular | 41.24 | 42.55 |
| Solyc02g086310.1.1 | Tomato | extracellular | 40.21 | 41.49 |
| CDY15627 | Canola | extracellular | 44.33 | 40.95 |
| CDY61301 | Canola | extracellular | 44.33 | 40.95 |
| CDY26874 | Canola | extracellular | 40.21 | 40.21 |
| CDY40472 | Canola | extracellular | 39.18 | 39.18 |
| CDY12874 | Canola | extracellular | 39.18 | 39.18 |
| CDY52889 | Canola | extracellular | 37.11 | 37.5 |
| CDX93624 | Canola | extracellular | 38.14 | 37.37 |
| CDY60143 | Canola | extracellular | 37.11 | 37.11 |
| CDX95132 | Canola | extracellular | 37.11 | 36.36 |
| CDX93626 | Canola | extracellular | 37.11 | 36.36 |
| CDX95131 | Canola | extracellular | 37.11 | 36.36 |
| CDY50600 | Canola | extracellular | 35.05 | 34.69 |
| CDY47738 | Canola | extracellular | 35.05 | 34.69 |
| CDY45874 | Canola | extracellular | 35.05 | 34.69 |
| CDY12591 | Canola | extracellular | 35.05 | 34.69 |
| CDY01688 | Canola | plastid | 42.27 | 31.06 |
| CDY04056 | Canola | extracellular | 28.87 | 27.72 |
| CDY70822 | Canola | extracellular | 25.77 | 24.51 |
| CDY44406 | Canola | extracellular | 26.8 | 14.05 |
Protein Annotations
| EnsemblPlants:CDX77289 | EnsemblPlantsGene:GSBRNA2T00128015001 | Gene3D:1.10.110.10 | GO:GO:0006810 | GO:GO:0006869 | GO:GO:0008150 |
| InterPro:Bifun_inhib/LTP/seed_sf | InterPro:Bifunc_inhib/LTP/seed_store | InterPro:nsLTP2 | PANTHER:PTHR33214 | PANTHER:PTHR33214:SF19 | PFAM:PF14368 |
| ProteinID:CDX77289 | ProteinID:CDX77289.1 | SEG:seg | SignalP:SignalP-noTM | SMART:SM00499 | SUPFAM:SSF47699 |
| TMHMM:TMhelix | UniParc:UPI0003C70C1B | MapMan:35.2 | : | : | : |
Description
BnaC08g03340D
Coordinates
chrLK031810:-:875307..875873
Molecular Weight (calculated)
10079.4 Da
IEP (calculated)
8.589
GRAVY (calculated)
0.346
Length
97 amino acids
Sequence
(BLAST)
(BLAST)
1: MVKVMWGSSL ALAVALLLVT VANIPVAEGV TCSPTELTSC SPAFMSASPP SATCCAKLRE QKPCLCGYLR NPTLSQYVNS PNAKKVASSC NVATPKC
1: MVKVMWVSVL ALAAAILLLT VPVAEGVTCS PMQLASCAAA MTSSSPPSEA CCTKLREQQP CLCGYMRNPT LRQYVSSPNA RKVSNSCKIP SPSC
Arabidopsis Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q94AQ3]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.