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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY12874 Canola extracellular 93.81 93.81
CDX93624 Canola extracellular 63.92 62.63
CDY61300 Canola extracellular 60.82 60.82
CDY15628 Canola extracellular 60.82 60.82
CDY26874 Canola extracellular 58.76 58.76
CDX95131 Canola extracellular 59.79 58.59
CDX93626 Canola extracellular 58.76 57.58
CDY61301 Canola extracellular 61.86 57.14
CDY15627 Canola extracellular 59.79 55.24
CDX95132 Canola extracellular 53.61 52.53
AT2G14846.1 Thale cress extracellular 49.48 48.48
CDY50600 Canola extracellular 48.45 47.96
AT3G57310.1 Thale cress extracellular 50.52 47.57
CDY12591 Canola extracellular 47.42 46.94
CDY52889 Canola extracellular 45.36 45.83
HORVU0Hr1G001480.2 Barley cytosol 20.62 41.67
AT1G07747.1 Thale cress extracellular 40.21 41.05
AT1G43666.1 Thale cress extracellular 40.21 40.62
GSMUA_Achr2P06400_001 Banana extracellular 37.11 39.56
CDY68337 Canola extracellular 39.18 39.18
CDY40833 Canola extracellular 39.18 39.18
CDY32103 Canola extracellular 39.18 39.18
CDX77289 Canola extracellular 39.18 39.18
AT4G12825.1 Thale cress extracellular 38.14 38.95
AT1G43667.1 Thale cress extracellular 39.18 38.78
CDX95546 Canola endoplasmic reticulum, extracellular, plasma membrane 38.14 38.54
CDY48021 Canola endoplasmic reticulum, extracellular, plasma membrane 38.14 38.54
GSMUA_Achr9P18720_001 Banana extracellular 36.08 38.46
CDY16462 Canola extracellular 38.14 38.14
CDY04317 Canola extracellular 38.14 38.14
CDX92224 Canola extracellular 37.11 37.5
CDX75963 Canola extracellular 37.11 37.5
CDY51937 Canola extracellular 37.11 37.5
CDY24453 Canola extracellular 36.08 36.46
TraesCS1D01G381200.1 Wheat extracellular 35.05 34.69
CDY04056 Canola extracellular 36.08 34.65
TraesCS3D01G261600.1 Wheat extracellular 32.99 33.68
TraesCS1D01G381300.1 Wheat extracellular 34.02 33.67
Os05t0550600-02 Rice extracellular 32.99 33.33
TraesCS1B01G394700.1 Wheat extracellular 32.99 32.99
TraesCS1A01G374500.1 Wheat extracellular 32.99 32.99
CDY60143 Canola extracellular 32.99 32.99
Os05t0550300-01 Rice extracellular 31.96 32.98
Zm00001d037677_P001 Maize endoplasmic reticulum, plasma membrane 34.02 32.67
CDY47738 Canola extracellular 32.99 32.65
CDY45874 Canola extracellular 32.99 32.65
TraesCS1A01G374400.1 Wheat extracellular 32.99 32.65
TraesCS3A01G261600.1 Wheat extracellular 31.96 32.63
CDY01688 Canola plastid 43.3 31.82
EES18626 Sorghum extracellular 34.02 31.73
TraesCS1D01G381600.1 Wheat extracellular 31.96 31.63
GSMUA_Achr9P21450_001 Banana endoplasmic reticulum, plasma membrane, plastid 35.05 31.48
TraesCS1A01G374200.1 Wheat extracellular 30.93 31.25
TraesCS1B01G394100.1 Wheat extracellular 30.93 31.25
TraesCS1B01G394400.1 Wheat extracellular 30.93 31.25
TraesCS1D01G380800.1 Wheat extracellular 30.93 31.25
EES18625 Sorghum extracellular 30.93 30.93
TraesCS3B01G294800.1 Wheat extracellular 29.9 30.21
HORVU1Hr1G083160.1 Barley extracellular 29.9 30.21
Zm00001d038911_P001 Maize extracellular 30.93 29.7
HORVU1Hr1G083170.1 Barley extracellular 28.87 29.17
TraesCS1B01G394500.1 Wheat extracellular 28.87 29.17
Zm00001d038913_P001 Maize endoplasmic reticulum, extracellular 28.87 28.57
CDY70822 Canola extracellular 29.9 28.43
TraesCS1D01G381100.1 Wheat extracellular 27.84 28.12
TraesCS1A01G374300.1 Wheat extracellular 27.84 28.12
AT1G43665.1 Thale cress extracellular 35.05 27.64
HORVU1Hr1G083180.1 Barley endoplasmic reticulum, extracellular 34.02 26.83
Os01t0691100-01 Rice endoplasmic reticulum, extracellular, mitochondrion 34.02 26.61
HORVU1Hr1G083210.1 Barley plastid 34.02 26.61
TraesCS1B01G394600.1 Wheat plastid 31.96 21.53
CDY44406 Canola extracellular 31.96 16.76
Protein Annotations
EnsemblPlants:CDY40472EnsemblPlantsGene:GSBRNA2T00069726001Gene3D:1.10.110.10GO:GO:0006810GO:GO:0006869GO:GO:0008150
InterPro:Bifun_inhib/LTP/seed_sfInterPro:Bifunc_inhib/LTP/seed_storeInterPro:nsLTP2PANTHER:PTHR33214PFAM:PF14368ProteinID:CDY40472
ProteinID:CDY40472.1SignalP:SignalP-noTMSMART:SM00499SUPFAM:SSF47699UniParc:UPI0004EE404BUniProt:A0A078HRL3
MapMan:35.2:::::
Description
BnaC09g14300DBnaC09g14300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HRL3]
Coordinates
chrLK032472:-:5191..5484
Molecular Weight (calculated)
10429.8 Da
IEP (calculated)
4.878
GRAVY (calculated)
0.535
Length
97 amino acids
Sequence
(BLAST)
1: MKFTRAICIA LVIVLVSSLD LTSAAVEEEI KVACVQTELI PCFVAAFIGS QPSAECCGKL KEQQSCLCGY IQNPTFGQFI KNSQNVFTAC GVPYPTC
Best Arabidopsis Sequence Match ( AT1G43666.1 )
(BLAST)
1: MRFITLVFIV SILSSVTLTK TLILGEEVKA TCDFTKFQVC KPEIITGSPP SEECCEKLKE QQSCLCAYLI SPSISQYIGN AKRVIRACGI PFPNCS
Arabidopsis Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q56Y90]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.