Factsheet for TraesCS1A01G374300.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G381100.1	Wheat	extracellular	96.88	96.88
TraesCS1B01G394500.1	Wheat	extracellular	95.83	95.83
HORVU0Hr1G001480.2	Barley	cytosol	44.79	89.58
HORVU1Hr1G083170.1	Barley	extracellular	87.5	87.5
TraesCS1A01G374200.1	Wheat	extracellular	82.29	82.29
Os05t0550300-01	Rice	extracellular	67.71	69.15
EES18625	Sorghum	extracellular	63.54	62.89
Zm00001d037677_P001	Maize	endoplasmic reticulum, plasma membrane	65.62	62.38
Zm00001d038911_P001	Maize	extracellular	63.54	60.4
TraesCS1A01G374500.1	Wheat	extracellular	51.04	50.52
TraesCS1A01G374400.1	Wheat	extracellular	50.0	48.98
VIT_14s0006g02530.t01	Wine grape	plastid	39.58	46.91
GSMUA_Achr9P18720_001	Banana	extracellular	43.75	46.15
GSMUA_Achr2P06400_001	Banana	extracellular	42.71	45.05
VIT_17s0000g03280.t01	Wine grape	extracellular	42.71	44.57
TraesCS5A01G554400.1	Wheat	extracellular, plastid	29.17	43.75
TraesCS1A01G175100.1	Wheat	extracellular	42.71	43.16
TraesCS1A01G175200.1	Wheat	extracellular, plastid	37.5	42.35
KRH48557	Soybean	extracellular	39.58	40.86
GSMUA_Achr9P21450_001	Banana	endoplasmic reticulum, plasma membrane, plastid	44.79	39.81
KRH39147	Soybean	extracellular	38.54	39.78
CDY52889	Canola	extracellular	39.58	39.58
KRH70406	Soybean	extracellular	38.54	38.95
TraesCS5A01G554300.1	Wheat	extracellular	38.54	38.54
KRH33571	Soybean	extracellular	39.58	38.0
KRH01717	Soybean	extracellular	37.5	37.89
Bra040627.1-P	Field mustard	extracellular	37.5	37.89
TraesCS3A01G261600.1	Wheat	extracellular	37.5	37.89
AT5G38170.1	Thale cress	extracellular	40.62	37.86
CDY50600	Canola	extracellular	38.54	37.76
CDY12591	Canola	extracellular	37.5	36.73
KRG93187	Soybean	extracellular	36.46	36.08
VIT_14s0006g02550.t01	Wine grape	extracellular	34.38	35.87
AT1G66850.1	Thale cress	extracellular	37.5	35.29
Bra028162.1-P	Field mustard	extracellular	37.5	35.29
AT5G38160.1	Thale cress	extracellular	37.5	34.95
AT1G07747.1	Thale cress	extracellular	33.33	33.68
KRH56524	Soybean	extracellular	34.38	33.0
TraesCS4A01G424000.1	Wheat	extracellular	29.17	31.46
TraesCS4A01G424100.1	Wheat	extracellular	29.17	31.46
TraesCS4A01G424200.1	Wheat	extracellular	29.17	31.46
AT2G14846.1	Thale cress	extracellular	32.29	31.31
CDX93626	Canola	extracellular	32.29	31.31
AT3G57310.1	Thale cress	extracellular	33.33	31.07
CDY61300	Canola	extracellular	31.25	30.93
Bra030699.1-P	Field mustard	extracellular	31.25	30.93
CDY15628	Canola	extracellular	31.25	30.93
AT5G38195.1	Thale cress	extracellular	30.21	30.53
CDX95131	Canola	extracellular	31.25	30.3
AT1G43666.1	Thale cress	extracellular	30.21	30.21
CDY61301	Canola	extracellular	32.29	29.52
Bra008375.1-P	Field mustard	extracellular	29.17	28.87
CDY26874	Canola	extracellular	29.17	28.87
CDY15627	Canola	extracellular	31.25	28.57
CDX95132	Canola	extracellular	29.17	28.28
Bra033084.1-P	Field mustard	extracellular	29.17	28.0
Bra027114.1-P	Field mustard	extracellular	28.12	27.84
CDY12874	Canola	extracellular	28.12	27.84
CDY40472	Canola	extracellular	28.12	27.84
CDY04056	Canola	extracellular	29.17	27.72
AT1G43667.1	Thale cress	extracellular	28.12	27.55
CDY70822	Canola	extracellular	29.17	27.45
AT4G12825.1	Thale cress	extracellular	27.08	27.37
AT5G38180.1	Thale cress	extracellular	27.08	27.37
Bra018687.1-P	Field mustard	extracellular	28.12	27.27
CDY01688	Canola	plastid	36.46	26.52
CDX93624	Canola	extracellular	27.08	26.26
AT5G38197.1	Thale cress	extracellular	25.0	25.0
AT1G43665.1	Thale cress	extracellular	30.21	23.58
CDY44406	Canola	extracellular	30.21	15.68
Bra033087.1-P	Field mustard	extracellular	30.21	14.22

Protein Annotations

EnsemblPlants:TraesCS1A01G374300.1	EnsemblPlantsGene:TraesCS1A01G374300	Gene3D:1.10.110.10	GO:GO:0006810	GO:GO:0006869	GO:GO:0008150
InterPro:Bifun_inhib/LTP/seed_sf	InterPro:Bifunc_inhib/LTP/seed_store	InterPro:nsLTP2	PANTHER:PTHR33214	PANTHER:PTHR33214:SF5	PFAM:PF14368
SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF47699	TIGR:cd01959	TMHMM:TMhelix	MapMan:35.2

Description

No Description!

Coordinates

chr1A:+:549666495..549666785

Molecular Weight (calculated)

10044.6 Da

IEP (calculated)

8.585

GRAVY (calculated)

0.459

Length

96 amino acids

Sequence
(BLAST)

1: MKYMGQLVVA LLAFWAVVLM MAPAGVDAAT CDALQLSPCA GAIVGNAAPT AVCCSRMKAQ RPCMCQYAHD PNLKQYVNSP NGKKVLAACK VPVPSC

Best Arabidopsis Sequence Match ( AT3G18280.1 )
(BLAST)

1: MVMIKTTMVS LFALAAVLLM ILAPAAEAVT CSPMQLSPCA TAITSSSPPS ALCCAKLKEQ RPCLCGYMRN PSLRRFVSTP NARKVSKSCK LPIPRC

Arabidopsis Description

Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LP30]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.