Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 8
- vacuole 4
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY50600 | Canola | extracellular | 73.53 | 76.53 |
| Bra040627.1-P | Field mustard | extracellular | 69.61 | 74.74 |
| CDY12591 | Canola | extracellular | 71.57 | 74.49 |
| CDY52889 | Canola | extracellular | 69.61 | 73.96 |
| AT5G38195.1 | Thale cress | extracellular | 45.1 | 48.42 |
| HORVU0Hr1G001480.2 | Barley | cytosol | 22.55 | 47.92 |
| AT2G14846.1 | Thale cress | extracellular | 46.08 | 47.47 |
| AT5G38160.1 | Thale cress | extracellular | 47.06 | 46.6 |
| AT5G38170.1 | Thale cress | extracellular | 45.1 | 44.66 |
| AT5G38197.1 | Thale cress | extracellular | 41.18 | 43.75 |
| AT1G07747.1 | Thale cress | extracellular | 40.2 | 43.16 |
| AT5G38180.1 | Thale cress | extracellular | 40.2 | 43.16 |
| AT1G48750.1 | Thale cress | extracellular | 39.22 | 42.55 |
| AT3G57310.1 | Thale cress | extracellular | 42.16 | 41.75 |
| TraesCS1D01G381200.1 | Wheat | extracellular | 39.22 | 40.82 |
| AT1G43666.1 | Thale cress | extracellular | 38.24 | 40.62 |
| TraesCS1B01G394700.1 | Wheat | extracellular | 38.24 | 40.21 |
| TraesCS1D01G381300.1 | Wheat | extracellular | 38.24 | 39.8 |
| Os05t0550300-01 | Rice | extracellular | 36.27 | 39.36 |
| EES18625 | Sorghum | extracellular | 37.25 | 39.18 |
| AT4G12825.1 | Thale cress | extracellular | 36.27 | 38.95 |
| Zm00001d037677_P001 | Maize | endoplasmic reticulum, plasma membrane | 38.24 | 38.61 |
| TraesCS1B01G394400.1 | Wheat | extracellular | 36.27 | 38.54 |
| TraesCS1B01G394100.1 | Wheat | extracellular | 36.27 | 38.54 |
| GSMUA_Achr2P06400_001 | Banana | extracellular | 34.31 | 38.46 |
| TraesCS1A01G374500.1 | Wheat | extracellular | 36.27 | 38.14 |
| TraesCS3A01G261600.1 | Wheat | extracellular | 35.29 | 37.89 |
| TraesCS3D01G261600.1 | Wheat | extracellular | 35.29 | 37.89 |
| TraesCS1A01G374400.1 | Wheat | extracellular | 36.27 | 37.76 |
| AT1G43667.1 | Thale cress | extracellular | 36.27 | 37.76 |
| Zm00001d038911_P001 | Maize | extracellular | 37.25 | 37.62 |
| HORVU1Hr1G083170.1 | Barley | extracellular | 35.29 | 37.5 |
| HORVU1Hr1G083160.1 | Barley | extracellular | 35.29 | 37.5 |
| TraesCS1D01G380800.1 | Wheat | extracellular | 35.29 | 37.5 |
| Os05t0550600-02 | Rice | extracellular | 35.29 | 37.5 |
| TraesCS1A01G374200.1 | Wheat | extracellular | 35.29 | 37.5 |
| TraesCS1A01G374300.1 | Wheat | extracellular | 35.29 | 37.5 |
| TraesCS1D01G381100.1 | Wheat | extracellular | 35.29 | 37.5 |
| TraesCS1B01G394500.1 | Wheat | extracellular | 35.29 | 37.5 |
| TraesCS1D01G381600.1 | Wheat | extracellular | 35.29 | 36.73 |
| EES18626 | Sorghum | extracellular | 37.25 | 36.54 |
| GSMUA_Achr9P18720_001 | Banana | extracellular | 32.35 | 36.26 |
| TraesCS3B01G294800.1 | Wheat | extracellular | 33.33 | 35.42 |
| GSMUA_Achr9P21450_001 | Banana | endoplasmic reticulum, plasma membrane, plastid | 36.27 | 34.26 |
| AT1G73780.1 | Thale cress | extracellular | 32.35 | 33.67 |
| Zm00001d038913_P001 | Maize | endoplasmic reticulum, extracellular | 31.37 | 32.65 |
| Os01t0691100-01 | Rice | endoplasmic reticulum, extracellular, mitochondrion | 39.22 | 32.26 |
| HORVU1Hr1G083210.1 | Barley | plastid | 38.24 | 31.45 |
| HORVU1Hr1G083180.1 | Barley | endoplasmic reticulum, extracellular | 37.25 | 30.89 |
| AT3G18280.2 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane, plastid | 36.27 | 30.83 |
| AT1G43665.1 | Thale cress | extracellular | 32.35 | 26.83 |
| TraesCS1B01G394600.1 | Wheat | plastid | 32.35 | 22.92 |
Protein Annotations
| Gene3D:1.10.110.10 | MapMan:35.2 | EntrezGene:843003 | UniProt:A0A178W531 | ProteinID:AAG60074.1 | ProteinID:AEE34562.1 |
| EMBL:AK117859 | ArrayExpress:AT1G66850 | EnsemblPlantsGene:AT1G66850 | RefSeq:AT1G66850 | TAIR:AT1G66850 | RefSeq:AT1G66850-TAIR-G |
| EnsemblPlants:AT1G66850.1 | TAIR:AT1G66850.1 | EMBL:AY086433 | EMBL:BT004688 | InterPro:Bifun_inhib/LTP/seed_sf | InterPro:Bifunc_inhib/LTP/seed_store |
| GO:GO:0006810 | GO:GO:0006869 | GO:GO:0008150 | RefSeq:NP_176857.1 | ProteinID:OAP12222.1 | PFAM:PF14368 |
| PO:PO:0000013 | PO:PO:0001078 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009010 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0025022 | PANTHER:PTHR33214 |
| PANTHER:PTHR33214:SF7 | UniProt:Q9C9N7 | SUPFAM:SSF47699 | SignalP:SignalP-noTM | UniParc:UPI000000C42B | InterPro:nsLTP2 |
| SEG:seg | : | : | : | : | : |
Description
At1g66850 [Source:UniProtKB/TrEMBL;Acc:Q9C9N7]
Coordinates
chr1:+:24936876..24937434
Molecular Weight (calculated)
10513.8 Da
IEP (calculated)
7.960
GRAVY (calculated)
0.451
Length
102 amino acids
Sequence
(BLAST)
(BLAST)
001: MKIVTLVLVV FVILSTSFPA AIKAEDTGDT GNVGVTCDAR QLQPCLAAIT GGGQPSGACC AKLTEQQSCL CGFAKNPAFA QYISSPNARK VLLACNVAYP
101: TC
101: TC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.