Factsheet for TraesCS1B01G394600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
extracellular 2
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	extracellular, plastid, vacuole
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	extracellular
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	vacuole
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G394700.1	Wheat	extracellular	56.94	84.54
TraesCS1D01G381300.1	Wheat	extracellular	55.56	81.63
TraesCS1A01G374400.1	Wheat	extracellular	54.86	80.61
HORVU1Hr1G083210.1	Barley	plastid	61.81	71.77
HORVU1Hr1G083180.1	Barley	endoplasmic reticulum, extracellular	58.33	68.29
EES18626	Sorghum	extracellular	45.83	63.46
Os05t0550600-02	Rice	extracellular	41.67	62.5
Zm00001d038913_P001	Maize	endoplasmic reticulum, extracellular	40.28	59.18
TraesCS1B01G394500.1	Wheat	extracellular	32.64	48.96
TraesCS1B01G394100.1	Wheat	extracellular	31.25	46.88
TraesCS1B01G394400.1	Wheat	extracellular	30.56	45.83
VIT_14s0006g02530.t01	Wine grape	plastid	23.61	41.98
GSMUA_Achr2P06400_001	Banana	extracellular	25.69	40.66
KRH70406	Soybean	extracellular	25.69	38.95
KRH01717	Soybean	extracellular	25.69	38.95
TraesCS4B01G393400.1	Wheat	extracellular	24.31	37.23
GSMUA_Achr9P18720_001	Banana	extracellular	22.92	36.26
VIT_17s0000g03280.t01	Wine grape	extracellular	22.92	35.87
VIT_14s0006g02550.t01	Wine grape	extracellular	22.92	35.87
KRH48557	Soybean	extracellular	22.92	35.48
CDY61301	Canola	extracellular	25.69	35.24
GSMUA_Achr9P21450_001	Banana	endoplasmic reticulum, plasma membrane, plastid	26.39	35.19
CDY15628	Canola	extracellular	23.61	35.05
CDY61300	Canola	extracellular	23.61	35.05
Bra030699.1-P	Field mustard	extracellular	23.61	35.05
KRH39147	Soybean	extracellular	22.22	34.41
CDY15627	Canola	extracellular	25.0	34.29
TraesCS7B01G312800.1	Wheat	extracellular	22.22	34.04
AT5G38160.1	Thale cress	extracellular	24.31	33.98
Bra040627.1-P	Field mustard	extracellular	22.22	33.68
TraesCS3B01G294800.1	Wheat	extracellular	22.22	33.33
AT5G38170.1	Thale cress	extracellular	23.61	33.01
KRH33571	Soybean	extracellular	22.92	33.0
KRG93187	Soybean	extracellular	22.22	32.99
TraesCS7B01G313000.1	Wheat	extracellular	21.53	32.98
CDY50600	Canola	extracellular	22.22	32.65
CDY12591	Canola	extracellular	22.22	32.65
AT1G07747.1	Thale cress	extracellular	21.53	32.63
TraesCS1B01G188600.1	Wheat	extracellular	21.53	32.63
TraesCS1B01G189600.1	Wheat	extracellular	21.53	32.63
TraesCS5B01G531100.1	Wheat	extracellular, unclear	20.83	32.61
AT1G66850.1	Thale cress	extracellular	22.92	32.35
AT2G14846.1	Thale cress	extracellular	22.22	32.32
CDX93624	Canola	extracellular	22.22	32.32
CDY52889	Canola	extracellular	21.53	32.29
KRH56524	Soybean	extracellular	22.22	32.0
CDY26874	Canola	extracellular	21.53	31.96
CDY40472	Canola	extracellular	21.53	31.96
Bra008375.1-P	Field mustard	extracellular	21.53	31.96
AT4G12825.1	Thale cress	extracellular	20.83	31.58
CDX95131	Canola	extracellular	21.53	31.31
CDY12874	Canola	extracellular	20.83	30.93
Bra027114.1-P	Field mustard	extracellular	20.83	30.93
TraesCS1B01G189400.1	Wheat	unclear	19.44	30.77
TraesCS5B01G531200.1	Wheat	extracellular, vacuole	20.83	30.61
Bra028162.1-P	Field mustard	extracellular	21.53	30.39
CDX93626	Canola	extracellular	20.83	30.3
TraesCS4B01G393300.1	Wheat	extracellular, unclear	20.14	30.21
AT1G43666.1	Thale cress	extracellular	20.14	30.21
TraesCS4B01G392800.1	Wheat	extracellular	19.44	30.11
AT3G57310.1	Thale cress	extracellular	21.53	30.1
TraesCS3B01G022200.1	Wheat	extracellular	20.14	29.59
Bra018687.1-P	Field mustard	extracellular	20.14	29.29
TraesCS2B01G537400.1	Wheat	extracellular	20.14	29.29
CDX95132	Canola	extracellular	20.14	29.29
AT5G38195.1	Thale cress	extracellular	18.75	28.42
AT1G43667.1	Thale cress	extracellular	18.75	27.55
Bra033084.1-P	Field mustard	extracellular	17.36	25.0
CDY70822	Canola	extracellular	17.36	24.51
CDY01688	Canola	plastid	22.22	24.24
AT5G38180.1	Thale cress	extracellular	15.97	24.21
CDY04056	Canola	extracellular	16.67	23.76
AT1G43665.1	Thale cress	extracellular	18.75	21.95
AT5G38197.1	Thale cress	extracellular	14.58	21.88
CDY44406	Canola	extracellular	17.36	13.51
Bra033087.1-P	Field mustard	extracellular	17.36	12.25

Protein Annotations

EnsemblPlants:TraesCS1B01G394600.1	EnsemblPlantsGene:TraesCS1B01G394600	Gene3D:1.10.110.10	GO:GO:0006810	GO:GO:0006869	GO:GO:0008150
InterPro:Bifun_inhib/LTP/seed_sf	InterPro:Bifunc_inhib/LTP/seed_store	InterPro:nsLTP2	PANTHER:PTHR33214	PANTHER:PTHR33214:SF5	SEG:seg
SMART:SM00499	SUPFAM:SSF47699	TIGR:cd01959	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr1B:+:626610162..626610596

Molecular Weight (calculated)

15027.1 Da

IEP (calculated)

9.798

GRAVY (calculated)

-0.246

Length

144 amino acids

Sequence
(BLAST)

001: MRPIKGAPFS TTQAAANSSP THSRTDTARE QLHHFPPSHP SPRSSNNGGV EGHPVCFMVV ALVTALLAAP GAVEAATCSP TQLPPCAPAT IGNAASSAAC
101: CGKLKAHPAS CLCKYKKDPN LQRYVNSRNG KKVFAACKLH LPRC

Best Arabidopsis Sequence Match ( AT3G18280.2 )
(BLAST)

001: MSKTTTHQKH ISINSETNKR SRRNMVMIKT TMVSLFALAA VLLMILAPAA EAVTCSPMQL SPCATAITSS SPPSALCCAK LKEQRPCLCG YMRNPSLRRF
101: VSTPNARKVS KSCKLPIPRC

Arabidopsis Description

Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LP30]
SUBAcon: [endoplasmic reticulum,plastid,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.