Factsheet for TraesCS4B01G393300.1

Subcellular Localization

min:

: max

Winner_takes_all: unclear, extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, unclear
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G554300.1	Wheat	extracellular	93.75	93.75
TraesCSU01G032900.1	Wheat	unclear	92.71	92.71
TraesCS5B01G531200.1	Wheat	extracellular, vacuole	92.71	90.82
TraesCS4B01G393400.1	Wheat	extracellular	72.92	74.47
TraesCS4B01G392800.1	Wheat	extracellular	69.79	72.04
TraesCS5B01G531100.1	Wheat	extracellular, unclear	67.71	70.65
HORVU4Hr1G089500.1	Barley	extracellular	66.67	64.0
TraesCS1B01G189400.1	Wheat	unclear	60.42	63.74
Zm00001d027332_P001	Maize	extracellular	55.21	54.08
TraesCS3B01G022200.1	Wheat	extracellular	54.17	53.06
TraesCS1B01G188600.1	Wheat	extracellular	52.08	52.63
Os03t0111300-01	Rice	extracellular	52.08	52.08
TraesCS1B01G189600.1	Wheat	extracellular	51.04	51.58
TraesCS7B01G312800.1	Wheat	extracellular	42.71	43.62
TraesCS7B01G313000.1	Wheat	extracellular	41.67	42.55
OQU93402	Sorghum	cytosol	53.12	40.48
VIT_14s0006g02530.t01	Wine grape	plastid	33.33	39.51
KRH01717	Soybean	extracellular	38.54	38.95
TraesCS1B01G394500.1	Wheat	extracellular	38.54	38.54
KRH70406	Soybean	extracellular	37.5	37.89
TraesCS1B01G394400.1	Wheat	extracellular	37.5	37.5
TraesCS1B01G394100.1	Wheat	extracellular	37.5	37.5
TraesCS2B01G537400.1	Wheat	extracellular	38.54	37.37
Solyc03g034390.1.1	Tomato	extracellular	36.46	36.84
TraesCS1B01G394700.1	Wheat	extracellular	36.46	36.08
TraesCS3B01G294800.1	Wheat	extracellular	35.42	35.42
VIT_17s0000g03280.t01	Wine grape	extracellular	33.33	34.78
KRH48557	Soybean	extracellular	33.33	34.41
KRH39147	Soybean	extracellular	33.33	34.41
VIT_14s0006g02550.t01	Wine grape	extracellular	32.29	33.7
PGSC0003DMT400056046	Potato	extracellular	34.38	33.0
KRH56524	Soybean	extracellular	32.29	31.0
KRH33571	Soybean	extracellular	31.25	30.0
KRG93187	Soybean	extracellular	30.21	29.9
TraesCS1B01G394600.1	Wheat	plastid	30.21	20.14

Protein Annotations

EnsemblPlants:TraesCS4B01G393300.1	EnsemblPlantsGene:TraesCS4B01G393300	Gene3D:1.10.110.10	GO:GO:0006810	GO:GO:0006869	GO:GO:0008150
InterPro:Bifun_inhib/LTP/seed_sf	InterPro:Bifunc_inhib/LTP/seed_store	InterPro:nsLTP2	PANTHER:PTHR33214	PANTHER:PTHR33214:SF18	PFAM:PF14368
SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF47699	TIGR:cd01959	MapMan:35.1	:

Description

No Description!

Coordinates

chr4B:-:667855279..667855569

Molecular Weight (calculated)

9832.1 Da

IEP (calculated)

8.589

GRAVY (calculated)

0.308

Length

96 amino acids

Sequence
(BLAST)

1: MAGMMKKQVV TALMLALVVL AAAPGGARAA CQASQLAVCA SAILSGAKPS GECCGNLRAQ QGCFCQYAKD PTYGQYIRSP HARDTLTSCG LAVPHC

Best Arabidopsis Sequence Match ( AT5G38170.1 )
(BLAST)

001: MKFTALVFIV FVVGVMVSPV SIRATEVKLS GGEADVTCDA VQLSSCATPM LTGVPPSTEC CGKLKEQQPC FCTYIKDPRY SQYVGSANAK KTLATCGVPY
101: PTC

Arabidopsis Description

Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FF39]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.