Factsheet for TraesCS1B01G394500.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G381100.1	Wheat	extracellular	96.88	96.88
TraesCS1A01G374300.1	Wheat	extracellular	95.83	95.83
HORVU1Hr1G083170.1	Barley	extracellular	91.67	91.67
HORVU0Hr1G001480.2	Barley	cytosol	45.83	91.67
TraesCS1B01G394100.1	Wheat	extracellular	89.58	89.58
TraesCS1B01G394400.1	Wheat	extracellular	87.5	87.5
Os05t0550300-01	Rice	extracellular	70.83	72.34
EES18625	Sorghum	extracellular	64.58	63.92
Zm00001d037677_P001	Maize	endoplasmic reticulum, plasma membrane	65.62	62.38
Zm00001d038911_P001	Maize	extracellular	63.54	60.4
TraesCS1B01G394700.1	Wheat	extracellular	54.17	53.61
VIT_14s0006g02530.t01	Wine grape	plastid	40.62	48.15
TraesCS7B01G312800.1	Wheat	extracellular	46.88	47.87
TraesCS7B01G313000.1	Wheat	extracellular	45.83	46.81
GSMUA_Achr9P18720_001	Banana	extracellular	43.75	46.15
GSMUA_Achr2P06400_001	Banana	extracellular	42.71	45.05
VIT_17s0000g03280.t01	Wine grape	extracellular	42.71	44.57
TraesCS1B01G189400.1	Wheat	unclear	40.62	42.86
TraesCS1B01G189600.1	Wheat	extracellular	41.67	42.11
TraesCS1B01G188600.1	Wheat	extracellular	41.67	42.11
KRH48557	Soybean	extracellular	39.58	40.86
KRH70406	Soybean	extracellular	39.58	40.0
GSMUA_Achr9P21450_001	Banana	endoplasmic reticulum, plasma membrane, plastid	44.79	39.81
TraesCS5B01G531200.1	Wheat	extracellular, vacuole	40.62	39.8
KRH39147	Soybean	extracellular	38.54	39.78
CDY52889	Canola	extracellular	39.58	39.58
KRH33571	Soybean	extracellular	40.62	39.0
KRH01717	Soybean	extracellular	38.54	38.95
AT5G38170.1	Thale cress	extracellular	41.67	38.84
TraesCS3B01G294800.1	Wheat	extracellular	38.54	38.54
TraesCS4B01G393300.1	Wheat	extracellular, unclear	38.54	38.54
Bra040627.1-P	Field mustard	extracellular	37.5	37.89
CDY50600	Canola	extracellular	38.54	37.76
Bra028162.1-P	Field mustard	extracellular	39.58	37.25
KRG93187	Soybean	extracellular	37.5	37.11
CDY12591	Canola	extracellular	37.5	36.73
TraesCS4B01G393400.1	Wheat	extracellular	35.42	36.17
AT5G38160.1	Thale cress	extracellular	38.54	35.92
VIT_14s0006g02550.t01	Wine grape	extracellular	34.38	35.87
TraesCS5B01G531100.1	Wheat	extracellular, unclear	34.38	35.87
TraesCS4B01G392800.1	Wheat	extracellular	34.38	35.48
AT1G66850.1	Thale cress	extracellular	37.5	35.29
AT1G07747.1	Thale cress	extracellular	34.38	34.74
KRH56524	Soybean	extracellular	35.42	34.0
TraesCS1B01G394600.1	Wheat	plastid	48.96	32.64
CDX93626	Canola	extracellular	33.33	32.32
AT2G14846.1	Thale cress	extracellular	33.33	32.32
AT3G57310.1	Thale cress	extracellular	34.38	32.04
CDY15628	Canola	extracellular	32.29	31.96
CDY61300	Canola	extracellular	32.29	31.96
Bra030699.1-P	Field mustard	extracellular	32.29	31.96
TraesCS3B01G022200.1	Wheat	extracellular	32.29	31.63
AT5G38195.1	Thale cress	extracellular	31.25	31.58
CDX95131	Canola	extracellular	32.29	31.31
AT1G43666.1	Thale cress	extracellular	31.25	31.25
CDY61301	Canola	extracellular	33.33	30.48
TraesCS2B01G537400.1	Wheat	extracellular	31.25	30.3
CDY26874	Canola	extracellular	30.21	29.9
Bra008375.1-P	Field mustard	extracellular	30.21	29.9
CDY15627	Canola	extracellular	32.29	29.52
CDX95132	Canola	extracellular	30.21	29.29
CDY40472	Canola	extracellular	29.17	28.87
CDY12874	Canola	extracellular	29.17	28.87
Bra027114.1-P	Field mustard	extracellular	29.17	28.87
AT1G43667.1	Thale cress	extracellular	29.17	28.57
AT4G12825.1	Thale cress	extracellular	28.12	28.42
AT5G38180.1	Thale cress	extracellular	28.12	28.42
Bra018687.1-P	Field mustard	extracellular	29.17	28.28
CDY01688	Canola	plastid	38.54	28.03
Bra033084.1-P	Field mustard	extracellular	29.17	28.0
CDY70822	Canola	extracellular	29.17	27.45
CDX93624	Canola	extracellular	28.12	27.27
CDY04056	Canola	extracellular	28.12	26.73
AT5G38197.1	Thale cress	extracellular	26.04	26.04
AT1G43665.1	Thale cress	extracellular	29.17	22.76
CDY44406	Canola	extracellular	30.21	15.68
Bra033087.1-P	Field mustard	extracellular	30.21	14.22

Protein Annotations

EnsemblPlants:TraesCS1B01G394500.1	EnsemblPlantsGene:TraesCS1B01G394500	Gene3D:1.10.110.10	GO:GO:0006810	GO:GO:0006869	GO:GO:0008150
InterPro:Bifun_inhib/LTP/seed_sf	InterPro:Bifunc_inhib/LTP/seed_store	InterPro:nsLTP2	PANTHER:PTHR33214	PANTHER:PTHR33214:SF5	PFAM:PF14368
SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF47699	TIGR:cd01959	TMHMM:TMhelix	MapMan:35.2

Description

No Description!

Coordinates

chr1B:+:626601013..626601303

Molecular Weight (calculated)

9950.5 Da

IEP (calculated)

8.772

GRAVY (calculated)

0.422

Length

96 amino acids

Sequence
(BLAST)

1: MKYMGQLVVA LLAFSAVVLM MAPAGAEAAT CDALQLSPCA GAIVGNAAPT AVCCSRMKAQ RPCMCQYARD PNLKQYVNSP NGKKVLAACK VPVPSC

Best Arabidopsis Sequence Match ( AT3G18280.2 )
(BLAST)

001: MSKTTTHQKH ISINSETNKR SRRNMVMIKT TMVSLFALAA VLLMILAPAA EAVTCSPMQL SPCATAITSS SPPSALCCAK LKEQRPCLCG YMRNPSLRRF
101: VSTPNARKVS KSCKLPIPRC

Arabidopsis Description

Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LP30]
SUBAcon: [endoplasmic reticulum,plastid,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.