Factsheet for TraesCS5B01G531100.1

Subcellular Localization

min:

: max

Winner_takes_all: unclear, extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, unclear
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G033800.1	Wheat	extracellular	93.48	92.47
TraesCSU01G033000.1	Wheat	extracellular	91.3	92.31
TraesCS4B01G392800.1	Wheat	extracellular	91.3	90.32
TraesCS5A01G554400.1	Wheat	extracellular, plastid	61.96	89.06
HORVU4Hr1G089490.1	Barley	extracellular	78.26	79.12
TraesCS4B01G393300.1	Wheat	extracellular, unclear	70.65	67.71
TraesCS5B01G531200.1	Wheat	extracellular, vacuole	70.65	66.33
TraesCS4B01G393400.1	Wheat	extracellular	67.39	65.96
TraesCS1B01G189400.1	Wheat	unclear	51.09	51.65
Os03t0111300-01	Rice	extracellular	53.26	51.04
TraesCS3B01G022200.1	Wheat	extracellular	52.17	48.98
Zm00001d027332_P001	Maize	extracellular	48.91	45.92
TraesCS1B01G188600.1	Wheat	extracellular	45.65	44.21
TraesCS1B01G189600.1	Wheat	extracellular	45.65	44.21
KRH01717	Soybean	extracellular	43.48	42.11
TraesCS7B01G312800.1	Wheat	extracellular	41.3	40.43
KRH70406	Soybean	extracellular	41.3	40.0
TraesCS7B01G313000.1	Wheat	extracellular	40.22	39.36
VIT_14s0006g02530.t01	Wine grape	plastid	32.61	37.04
TraesCS1B01G394500.1	Wheat	extracellular	35.87	34.38
TraesCS1B01G394400.1	Wheat	extracellular	35.87	34.38
TraesCS1B01G394100.1	Wheat	extracellular	35.87	34.38
OQU93402	Sorghum	cytosol	46.74	34.13
TraesCS1B01G394700.1	Wheat	extracellular	35.87	34.02
VIT_17s0000g03280.t01	Wine grape	extracellular	32.61	32.61
TraesCS3B01G294800.1	Wheat	extracellular	33.7	32.29
KRH48557	Soybean	extracellular	32.61	32.26
KRH39147	Soybean	extracellular	32.61	32.26
KRH56524	Soybean	extracellular	33.7	31.0
KRG93187	Soybean	extracellular	32.61	30.93
Solyc03g034390.1.1	Tomato	extracellular	31.52	30.53
VIT_14s0006g02550.t01	Wine grape	extracellular	30.43	30.43
TraesCS2B01G537400.1	Wheat	extracellular	32.61	30.3
KRH33571	Soybean	extracellular	32.61	30.0
PGSC0003DMT400056046	Potato	extracellular	30.43	28.0
TraesCS1B01G394600.1	Wheat	plastid	32.61	20.83

Protein Annotations

EnsemblPlants:TraesCS5B01G531100.1	EnsemblPlantsGene:TraesCS5B01G531100	Gene3D:1.10.110.10	GO:GO:0006810	GO:GO:0006869	GO:GO:0008150
InterPro:Bifun_inhib/LTP/seed_sf	InterPro:Bifunc_inhib/LTP/seed_store	InterPro:nsLTP2	PANTHER:PTHR33214	PANTHER:PTHR33214:SF18	PFAM:PF14368
SEG:seg	SignalP:SignalP-noTM	SMART:SM00499	SUPFAM:SSF47699	TIGR:cd01959	MapMan:35.1

Description

No Description!

Coordinates

chr5B:-:689336940..689337218

Molecular Weight (calculated)

9462.7 Da

IEP (calculated)

7.987

GRAVY (calculated)

0.437

Length

92 amino acids

Sequence
(BLAST)

1: MRKEVLLAAM MLALVVAAPG GAHAACEVGQ LTVCMPAITT GAKPSEACCG SLRAQQACFC QYAKDPSLGA YIRSPHARET LVSCGLAVPH CS

Best Arabidopsis Sequence Match ( AT4G12825.1 )
(BLAST)

1: MKFITSVFIV FIMLSLILTK TMISGKEENA TCVMANLQIC KSAVTTGNPH SKECCEKLKE QQSCFCEYLK DPLVVPYITY AKIILAACGL SFPNC

Arabidopsis Description

Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:A8MRI8]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.