Factsheet for Zm00001d027332_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 1
extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

extracellular: 22192489

msms PMID: 22192489 doi

K Witzel, M Shahzad, A Matros, HP Mock, KH Mühling

Institute of Plant Nutrition and Soil Science, Christian Albrechts University, Hermann-Rodewald-Strasse 2, 24118 Kiel, Germany. khmuehling@plantnutrition.uni-kiel.de.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G554400.1	Wheat	extracellular, plastid	41.84	64.06
TraesCS3D01G023400.1	Wheat	plastid	51.02	59.52
TraesCS5A01G554300.1	Wheat	extracellular	56.12	57.29
Zm00001d013907_P001	Maize	plastid	56.12	57.29
Os03t0111300-01	Rice	extracellular	56.12	57.29
TraesCSU01G032900.1	Wheat	unclear	55.1	56.25
TraesCS5B01G531200.1	Wheat	extracellular, vacuole	56.12	56.12
OQU93402	Sorghum	cytosol	71.43	55.56
TraesCS4B01G393300.1	Wheat	extracellular, unclear	54.08	55.21
TraesCS3B01G022200.1	Wheat	extracellular	55.1	55.1
HORVU4Hr1G089490.1	Barley	extracellular	51.02	54.95
TraesCSU01G033100.1	Wheat	extracellular	43.88	53.09
TraesCSU01G033800.1	Wheat	extracellular	47.96	50.54
TraesCS4B01G393400.1	Wheat	extracellular	47.96	50.0
TraesCS4B01G392800.1	Wheat	extracellular	46.94	49.46
TraesCS5B01G531100.1	Wheat	extracellular, unclear	45.92	48.91
TraesCSU01G032800.1	Wheat	extracellular	46.94	48.42
TraesCSU01G033000.1	Wheat	extracellular	44.9	48.35
HORVU4Hr1G089500.1	Barley	extracellular	48.98	48.0
Zm00001d038913_P001	Maize	endoplasmic reticulum, extracellular	47.96	47.96
KRH70406	Soybean	extracellular	45.92	47.37
KRH01717	Soybean	extracellular	42.86	44.21
VIT_17s0000g03280.t01	Wine grape	extracellular	40.82	43.48
Zm00001d037677_P001	Maize	endoplasmic reticulum, plasma membrane	43.88	42.57
Zm00001d052759_P001	Maize	extracellular	41.84	42.27
VIT_14s0006g02530.t01	Wine grape	plastid	34.69	41.98
KRH48557	Soybean	extracellular	38.78	40.86
KRH39147	Soybean	extracellular	38.78	40.86
Zm00001d036452_P001	Maize	extracellular	37.76	39.36
VIT_14s0006g02550.t01	Wine grape	extracellular	34.69	36.96
Zm00001d038911_P001	Maize	extracellular	37.76	36.63
KRH56524	Soybean	extracellular	36.73	36.0
Zm00001d007299_P001	Maize	extracellular	35.71	35.35
KRG93187	Soybean	extracellular	34.69	35.05
KRH33571	Soybean	extracellular	33.67	33.0
Solyc03g034390.1.1	Tomato	extracellular	31.63	32.63
PGSC0003DMT400056046	Potato	extracellular	31.63	31.0

Protein Annotations

EnsemblPlants:Zm00001d027332_P001	EnsemblPlants:Zm00001d027332_T001	EnsemblPlantsGene:Zm00001d027332	EntrezGene:107403162	Gene3D:1.10.110.10	GO:GO:0006810
GO:GO:0006869	GO:GO:0008150	InterPro:Bifun_inhib/LTP/seed_sf	InterPro:Bifunc_inhib/LTP/seed_store	InterPro:nsLTP2	PANTHER:PTHR33214
PANTHER:PTHR33214:SF18	PFAM:PF14368	ProteinID:ONL92812.1	SEG:seg	SignalP:SignalP-noTM	SMART:SM00499
SUPFAM:SSF47699	UniParc:UPI000221540C	UniProt:A0A1D6JKW8	MapMan:35.1	:	:

Description

Nonspecific lipid-transfer protein

Coordinates

chr1:-:3095308..3095604

Molecular Weight (calculated)

9865.0 Da

IEP (calculated)

8.999

GRAVY (calculated)

0.349

Length

98 amino acids

Sequence
(BLAST)

1: MAKQQQQGMA AVALVVLVVL ATAAAETASA ASCNAGQLAA CAPAITAGAR PSASCCSNLK AQQGCFCQFV KNPTYGRYIN SPNARKVVAS CGVSVPRC

Best Arabidopsis Sequence Match ( AT3G18280.2 )
(BLAST)

001: MSKTTTHQKH ISINSETNKR SRRNMVMIKT TMVSLFALAA VLLMILAPAA EAVTCSPMQL SPCATAITSS SPPSALCCAK LKEQRPCLCG YMRNPSLRRF
101: VSTPNARKVS KSCKLPIPRC

Arabidopsis Description

Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LP30]
SUBAcon: [endoplasmic reticulum,plastid,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.