Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G393400.1 | Wheat | extracellular | 90.53 | 91.49 |
| TraesCSU01G032900.1 | Wheat | unclear | 72.63 | 71.88 |
| HORVU4Hr1G089500.1 | Barley | extracellular | 73.68 | 70.0 |
| TraesCSU01G033100.1 | Wheat | extracellular | 57.89 | 67.9 |
| TraesCSU01G033000.1 | Wheat | extracellular | 64.21 | 67.03 |
| TraesCSU01G033800.1 | Wheat | extracellular | 65.26 | 66.67 |
| Os03t0111300-01 | Rice | extracellular | 50.53 | 50.0 |
| Zm00001d027332_P001 | Maize | extracellular | 48.42 | 46.94 |
| KRH70406 | Soybean | extracellular | 41.05 | 41.05 |
| KRH01717 | Soybean | extracellular | 41.05 | 41.05 |
| VIT_17s0000g03280.t01 | Wine grape | extracellular | 38.95 | 40.22 |
| KRH48557 | Soybean | extracellular | 38.95 | 39.78 |
| VIT_14s0006g02530.t01 | Wine grape | plastid | 33.68 | 39.51 |
| KRH39147 | Soybean | extracellular | 36.84 | 37.63 |
| OQU93402 | Sorghum | cytosol | 49.47 | 37.3 |
| VIT_14s0006g02550.t01 | Wine grape | extracellular | 34.74 | 35.87 |
| Solyc03g034390.1.1 | Tomato | extracellular | 34.74 | 34.74 |
| PGSC0003DMT400056046 | Potato | extracellular | 35.79 | 34.0 |
| KRH56524 | Soybean | extracellular | 33.68 | 32.0 |
| KRG93187 | Soybean | extracellular | 32.63 | 31.96 |
| KRH33571 | Soybean | extracellular | 31.58 | 30.0 |
Protein Annotations
| EnsemblPlants:TraesCSU01G032800.1 | EnsemblPlantsGene:TraesCSU01G032800 | Gene3D:1.10.110.10 | GO:GO:0006810 | GO:GO:0006869 | GO:GO:0008150 |
| InterPro:Bifun_inhib/LTP/seed_sf | InterPro:Bifunc_inhib/LTP/seed_store | InterPro:nsLTP2 | PANTHER:PTHR33214 | PANTHER:PTHR33214:SF18 | PFAM:PF14368 |
| SEG:seg | SignalP:SignalP-noTM | SMART:SM00499 | SUPFAM:SSF47699 | TIGR:cd01959 | MapMan:35.1 |
Description
No Description!
Coordinates
chrUn:+:29789284..29789571
Molecular Weight (calculated)
10166.5 Da
IEP (calculated)
7.685
GRAVY (calculated)
0.225
Length
95 amino acids
Sequence
(BLAST)
(BLAST)
1: MAMMRKEAVV ALMLALVLLA EVPGWARAEC QVTQLAVCAS AILGGTKPSG ECCGNLRAQQ GCFCQYVKDP NYGHYVNSPH ARETLQTCGI ALPHC
001: MKFTALVFIV FVVGVMVSPV SIRATEVKLS GGEADVTCDA VQLSSCATPM LTGVPPSTEC CGKLKEQQPC FCTYIKDPRY SQYVGSANAK KTLATCGVPY
101: PTC
101: PTC
Arabidopsis Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FF39]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.