Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G554400.1 | Wheat | extracellular, plastid | 72.84 | 92.19 |
| TraesCSU01G033800.1 | Wheat | extracellular | 96.3 | 83.87 |
| TraesCSU01G033000.1 | Wheat | extracellular | 93.83 | 83.52 |
| TraesCS4B01G392800.1 | Wheat | extracellular | 95.06 | 82.8 |
| HORVU4Hr1G089490.1 | Barley | extracellular | 81.48 | 72.53 |
| TraesCSU01G032900.1 | Wheat | unclear | 75.31 | 63.54 |
| TraesCSU01G032800.1 | Wheat | extracellular | 67.9 | 57.89 |
| Os03t0111300-01 | Rice | extracellular | 56.79 | 47.92 |
| Zm00001d027332_P001 | Maize | extracellular | 53.09 | 43.88 |
| KRH01717 | Soybean | extracellular | 45.68 | 38.95 |
| KRH70406 | Soybean | extracellular | 44.44 | 37.89 |
| VIT_14s0006g02530.t01 | Wine grape | plastid | 35.8 | 35.8 |
| OQU93402 | Sorghum | cytosol | 51.85 | 33.33 |
| VIT_17s0000g03280.t01 | Wine grape | extracellular | 35.8 | 31.52 |
| KRH48557 | Soybean | extracellular | 35.8 | 31.18 |
| KRH39147 | Soybean | extracellular | 35.8 | 31.18 |
| KRH56524 | Soybean | extracellular | 37.04 | 30.0 |
| KRG93187 | Soybean | extracellular | 35.8 | 29.9 |
| Solyc03g034390.1.1 | Tomato | extracellular | 34.57 | 29.47 |
| KRH33571 | Soybean | extracellular | 35.8 | 29.0 |
| VIT_14s0006g02550.t01 | Wine grape | extracellular | 32.1 | 28.26 |
| PGSC0003DMT400056046 | Potato | extracellular | 33.33 | 27.0 |
Protein Annotations
| EnsemblPlants:TraesCSU01G033100.1 | EnsemblPlantsGene:TraesCSU01G033100 | Gene3D:1.10.110.10 | GO:GO:0006810 | GO:GO:0006869 | GO:GO:0008150 |
| InterPro:Bifun_inhib/LTP/seed_sf | InterPro:Bifunc_inhib/LTP/seed_store | InterPro:nsLTP2 | PANTHER:PTHR33214 | PANTHER:PTHR33214:SF18 | PFAM:PF14368 |
| SignalP:SignalP-noTM | SMART:SM00499 | SUPFAM:SSF47699 | TIGR:cd01959 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chrUn:+:29841789..29842034
Molecular Weight (calculated)
8209.1 Da
IEP (calculated)
7.979
GRAVY (calculated)
0.506
Length
81 amino acids
Sequence
(BLAST)
(BLAST)
1: MLALVMAAPG GALAACEVGQ LTVCMPAITT GAKPSGACCA NLRAQQACFC QYAKDPSLGA YIRSPHARET LVSCGLAVPH C
001: MKIVTLVLVV FVILSTSFPA AIKAEDTGDT GNVGVTCDAR QLQPCLAAIT GGGQPSGACC AKLTEQQSCL CGFAKNPAFA QYISSPNARK VLLACNVAYP
101: TC
101: TC
Arabidopsis Description
At1g66850 [Source:UniProtKB/TrEMBL;Acc:Q9C9N7]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.