Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G033100.1 | Wheat | extracellular | 82.8 | 95.06 |
| TraesCS5B01G531100.1 | Wheat | extracellular, unclear | 90.32 | 91.3 |
| TraesCS5A01G554400.1 | Wheat | extracellular, plastid | 61.29 | 89.06 |
| HORVU4Hr1G089490.1 | Barley | extracellular | 81.72 | 83.52 |
| TraesCS4B01G393300.1 | Wheat | extracellular, unclear | 72.04 | 69.79 |
| TraesCS5B01G531200.1 | Wheat | extracellular, vacuole | 72.04 | 68.37 |
| TraesCS4B01G393400.1 | Wheat | extracellular | 66.67 | 65.96 |
| TraesCS1B01G189400.1 | Wheat | unclear | 51.61 | 52.75 |
| TraesCS3B01G022200.1 | Wheat | extracellular | 54.84 | 52.04 |
| Os03t0111300-01 | Rice | extracellular | 51.61 | 50.0 |
| Zm00001d027332_P001 | Maize | extracellular | 49.46 | 46.94 |
| TraesCS1B01G188600.1 | Wheat | extracellular | 46.24 | 45.26 |
| TraesCS1B01G189600.1 | Wheat | extracellular | 46.24 | 45.26 |
| KRH01717 | Soybean | extracellular | 44.09 | 43.16 |
| KRH70406 | Soybean | extracellular | 41.94 | 41.05 |
| TraesCS7B01G312800.1 | Wheat | extracellular | 40.86 | 40.43 |
| TraesCS7B01G313000.1 | Wheat | extracellular | 39.78 | 39.36 |
| OQU93402 | Sorghum | cytosol | 48.39 | 35.71 |
| VIT_14s0006g02530.t01 | Wine grape | plastid | 30.11 | 34.57 |
| TraesCS1B01G394500.1 | Wheat | extracellular | 35.48 | 34.38 |
| TraesCS1B01G394400.1 | Wheat | extracellular | 35.48 | 34.38 |
| TraesCS1B01G394100.1 | Wheat | extracellular | 35.48 | 34.38 |
| TraesCS1B01G394700.1 | Wheat | extracellular | 35.48 | 34.02 |
| TraesCS3B01G294800.1 | Wheat | extracellular | 34.41 | 33.33 |
| Solyc03g034390.1.1 | Tomato | extracellular | 32.26 | 31.58 |
| VIT_17s0000g03280.t01 | Wine grape | extracellular | 31.18 | 31.52 |
| TraesCS2B01G537400.1 | Wheat | extracellular | 33.33 | 31.31 |
| KRH48557 | Soybean | extracellular | 31.18 | 31.18 |
| KRH39147 | Soybean | extracellular | 31.18 | 31.18 |
| KRG93187 | Soybean | extracellular | 32.26 | 30.93 |
| KRH56524 | Soybean | extracellular | 32.26 | 30.0 |
| KRH33571 | Soybean | extracellular | 32.26 | 30.0 |
| VIT_14s0006g02550.t01 | Wine grape | extracellular | 29.03 | 29.35 |
| PGSC0003DMT400056046 | Potato | extracellular | 31.18 | 29.0 |
| TraesCS1B01G394600.1 | Wheat | plastid | 30.11 | 19.44 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G392800.1 | EnsemblPlantsGene:TraesCS4B01G392800 | Gene3D:1.10.110.10 | GO:GO:0006810 | GO:GO:0006869 | GO:GO:0008150 |
| InterPro:Bifun_inhib/LTP/seed_sf | InterPro:Bifunc_inhib/LTP/seed_store | InterPro:nsLTP2 | PANTHER:PTHR33214 | PANTHER:PTHR33214:SF18 | PFAM:PF14368 |
| SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF47699 | TIGR:cd01959 | TMHMM:TMhelix | MapMan:35.1 |
Description
No Description!
Coordinates
chr4B:+:667648682..667649238
Molecular Weight (calculated)
9553.0 Da
IEP (calculated)
8.211
GRAVY (calculated)
0.575
Length
93 amino acids
Sequence
(BLAST)
(BLAST)
1: MAMRKEVLLA AMMLALLVAA PGGALAACEV GQLTVCMPAI TTGAKPSGAC CANLRAQQAC FCQYAKDPSL GAYIRSPHAR DTLVSCSLAV PHC
001: MKIVTLVLVV FVILSTSFPA AIKAEDTGDT GNVGVTCDAR QLQPCLAAIT GGGQPSGACC AKLTEQQSCL CGFAKNPAFA QYISSPNARK VLLACNVAYP
101: TC
101: TC
Arabidopsis Description
At1g66850 [Source:UniProtKB/TrEMBL;Acc:Q9C9N7]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.