Factsheet for TraesCS1B01G189400.1

Subcellular Localization

min:

: max

Winner_takes_all: unclear

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	unclear
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G163900.1	Wheat	unclear	90.11	90.11
TraesCS1A01G175200.1	Wheat	extracellular, plastid	81.32	87.06
Os10t0505700-01	Rice	extracellular, nucleus, plastid	68.13	68.13
Zm00001d013907_P001	Maize	plastid	68.13	64.58
HORVU1Hr1G046400.1	Barley	cytosol, plasma membrane, plastid	85.71	63.93
EER91405	Sorghum	extracellular	68.13	63.27
TraesCS4B01G393300.1	Wheat	extracellular, unclear	63.74	60.42
TraesCS5B01G531200.1	Wheat	extracellular, vacuole	62.64	58.16
TraesCS1B01G188600.1	Wheat	extracellular	57.14	54.74
EER91406	Sorghum	plasma membrane	56.04	53.68
TraesCS1B01G189600.1	Wheat	extracellular	56.04	53.68
TraesCS4B01G393400.1	Wheat	extracellular	54.95	53.19
TraesCS4B01G392800.1	Wheat	extracellular	52.75	51.61
TraesCS5B01G531100.1	Wheat	extracellular, unclear	51.65	51.09
TraesCS3B01G022200.1	Wheat	extracellular	54.95	51.02
KRH70406	Soybean	extracellular	43.96	42.11
KRH01717	Soybean	extracellular	43.96	42.11
VIT_14s0006g02530.t01	Wine grape	plastid	37.36	41.98
VIT_17s0000g03280.t01	Wine grape	extracellular	41.76	41.3
TraesCS1B01G394500.1	Wheat	extracellular	42.86	40.62
TraesCS7B01G313000.1	Wheat	extracellular	41.76	40.43
TraesCS7B01G312800.1	Wheat	extracellular	41.76	40.43
TraesCS1B01G394100.1	Wheat	extracellular	39.56	37.5
TraesCS1B01G394400.1	Wheat	extracellular	39.56	37.5
VIT_14s0006g02550.t01	Wine grape	extracellular	36.26	35.87
TraesCS1B01G394700.1	Wheat	extracellular	37.36	35.05
Solyc03g034390.1.1	Tomato	extracellular	36.26	34.74
KRH48557	Soybean	extracellular	35.16	34.41
TraesCS2B01G537400.1	Wheat	extracellular	37.36	34.34
KRH56524	Soybean	extracellular	37.36	34.0
TraesCS3B01G294800.1	Wheat	extracellular	35.16	33.33
KRH39147	Soybean	extracellular	34.07	33.33
KRG93187	Soybean	extracellular	35.16	32.99
KRH33571	Soybean	extracellular	35.16	32.0
PGSC0003DMT400056046	Potato	extracellular	35.16	32.0
TraesCS1B01G394600.1	Wheat	plastid	30.77	19.44

Protein Annotations

EnsemblPlants:TraesCS1B01G189400.1	EnsemblPlantsGene:TraesCS1B01G189400	Gene3D:1.10.110.10	GO:GO:0006810	GO:GO:0006869	GO:GO:0008150
InterPro:Bifun_inhib/LTP/seed_sf	InterPro:Bifunc_inhib/LTP/seed_store	InterPro:nsLTP2	PANTHER:PTHR33214	PANTHER:PTHR33214:SF10	PFAM:PF14368
SEG:seg	SignalP:SignalP-noTM	SMART:SM00499	SUPFAM:SSF47699	TIGR:cd01959	TMHMM:TMhelix
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr1B:-:339364373..339364648

Molecular Weight (calculated)

9161.2 Da

IEP (calculated)

9.219

GRAVY (calculated)

0.408

Length

91 amino acids

Sequence
(BLAST)

1: MAKAAAMLVL VALVVAAMAT GGAAQCNAGS LAVCASPIIS GAKPSTTCCN NLKSQRGCFC QYARNPAYSS YINSPNARKT LTSCGVAVPK C

Best Arabidopsis Sequence Match ( AT5G38160.1 )
(BLAST)

001: MKFTGVVFIL FVLGTMLSPV PVKARVVKGS GEEVNVTCDA TQLSSCVTAV STGAPPSTDC CGKLKEHETC LCTYIQNPLY SSYVTSPNAR KTLAACDVAY
101: PTC

Arabidopsis Description

Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FF40]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.