Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G189400.1 | Wheat | unclear | 63.93 | 85.71 |
| TraesCS1D01G163900.1 | Wheat | unclear | 61.48 | 82.42 |
| TraesCS1A01G175200.1 | Wheat | extracellular, plastid | 57.38 | 82.35 |
| Os10t0505700-01 | Rice | extracellular, nucleus, plastid | 49.18 | 65.93 |
| Zm00001d013907_P001 | Maize | plastid | 47.54 | 60.42 |
| EER91405 | Sorghum | extracellular | 48.36 | 60.2 |
| HORVU4Hr1G089490.1 | Barley | extracellular | 40.16 | 53.85 |
| EER91406 | Sorghum | plasma membrane | 40.16 | 51.58 |
| HORVU0Hr1G001480.2 | Barley | cytosol | 19.67 | 50.0 |
| HORVU4Hr1G089500.1 | Barley | extracellular | 35.25 | 43.0 |
| HORVU1Hr1G083170.1 | Barley | extracellular | 32.79 | 41.67 |
| HORVU1Hr1G046370.1 | Barley | extracellular | 45.08 | 41.35 |
| VIT_17s0000g03280.t01 | Wine grape | extracellular | 31.15 | 41.3 |
| KRH01717 | Soybean | extracellular | 31.97 | 41.05 |
| KRH70406 | Soybean | extracellular | 31.15 | 40.0 |
| VIT_14s0006g02530.t01 | Wine grape | plastid | 26.23 | 39.51 |
| HORVU1Hr1G083160.1 | Barley | extracellular | 30.33 | 38.54 |
| HORVU2Hr1G108660.1 | Barley | extracellular | 27.87 | 36.17 |
| KRH48557 | Soybean | extracellular | 26.23 | 34.41 |
| VIT_14s0006g02550.t01 | Wine grape | extracellular | 25.41 | 33.7 |
| KRH39147 | Soybean | extracellular | 25.41 | 33.33 |
| KRH56524 | Soybean | extracellular | 27.05 | 33.0 |
| KRG93187 | Soybean | extracellular | 25.41 | 31.96 |
| HORVU1Hr1G083210.1 | Barley | plastid | 31.97 | 31.45 |
| KRH33571 | Soybean | extracellular | 25.41 | 31.0 |
| Solyc03g034390.1.1 | Tomato | extracellular | 23.77 | 30.53 |
| HORVU1Hr1G083180.1 | Barley | endoplasmic reticulum, extracellular | 29.51 | 29.27 |
| PGSC0003DMT400056046 | Potato | extracellular | 23.77 | 29.0 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G046400.1 | EnsemblPlantsGene:HORVU1Hr1G046400 | Gene3D:1.10.110.10 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006869 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | InterPro:Bifun_inhib/LTP/seed_sf | InterPro:Bifunc_inhib/LTP/seed_store | InterPro:nsLTP2 |
| PANTHER:PTHR33214 | PANTHER:PTHR33214:SF18 | PFAM:PF14368 | SEG:seg | SUPFAM:SSF47699 | TMHMM:TMhelix |
| UniParc:UPI000B4649E7 | UniProt:A0A287FEE6 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chrchr1H:+:340632852..340633956
Molecular Weight (calculated)
12653.4 Da
IEP (calculated)
9.329
GRAVY (calculated)
0.206
Length
122 amino acids
Sequence
(BLAST)
(BLAST)
001: CLPCTSNHST HFQFHHSTAV RTFAVKSKPG HMAKAAAMFV LVALVAAAMA TGGAAQCNAG SLTVCAGPII SGTMPSQTCC ANLKNQRGCF CQFARNPAYS
101: TYINSPNARK TLASCGVAVP RC
101: TYINSPNARK TLASCGVAVP RC
001: MKFTALVFIV FVVGVMVSPV SIRATEVKLS GGEADVTCDA VQLSSCATPM LTGVPPSTEC CGKLKEQQPC FCTYIKDPRY SQYVGSANAK KTLATCGVPY
101: PTC
101: PTC
Arabidopsis Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FF39]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.