Factsheet for Os10t0505700-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular, nucleus

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, nucleus, plastid
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

nucleus: 19621931
plastid: 21433289

msms PMID: 21433289 doi

S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky

Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.

msms PMID: 19621931 doi

T Aki, S Yanagisawa

Department of Applied Biological Chemistry, The University of Tokyo, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G189400.1	Wheat	unclear	68.13	68.13
TraesCS1D01G163900.1	Wheat	unclear	64.84	64.84
Zm00001d013907_P001	Maize	plastid	68.13	64.58
TraesCS1A01G175200.1	Wheat	extracellular, plastid	56.04	60.0
Os10t0504900-01	Rice	extracellular	51.65	57.32
EER91406	Sorghum	plasma membrane	59.34	56.84
EER91405	Sorghum	extracellular	60.44	56.12
Os10t0505000-01	Rice	extracellular	61.54	56.0
Os03t0111300-01	Rice	extracellular	56.04	53.12
Os10t0504650-00	Rice	endoplasmic reticulum, extracellular, plasma membrane	58.24	53.0
Os10t0505500-01	Rice	extracellular	53.85	52.13
HORVU1Hr1G046400.1	Barley	cytosol, plasma membrane, plastid	65.93	49.18
Os05t0550300-01	Rice	extracellular	46.15	44.68
KRH01717	Soybean	extracellular	45.05	43.16
Os06t0705400-02	Rice	extracellular, plasma membrane	42.86	41.49
KRH70406	Soybean	extracellular	41.76	40.0
VIT_17s0000g03280.t01	Wine grape	extracellular	39.56	39.13
Os05t0550600-02	Rice	extracellular	40.66	38.54
VIT_14s0006g02530.t01	Wine grape	plastid	34.07	38.27
Solyc03g034390.1.1	Tomato	extracellular	37.36	35.79
KRH33571	Soybean	extracellular	36.26	33.0
PGSC0003DMT400056046	Potato	extracellular	36.26	33.0
KRG93187	Soybean	extracellular	35.16	32.99
Os11t0620300-01	Rice	extracellular	39.56	32.73
KRH48557	Soybean	extracellular	32.97	32.26
KRH39147	Soybean	extracellular	31.87	31.18
KRH56524	Soybean	extracellular	34.07	31.0
Os01t0691100-01	Rice	endoplasmic reticulum, extracellular, mitochondrion	41.76	30.65
VIT_14s0006g02550.t01	Wine grape	extracellular	29.67	29.35

Protein Annotations

Gene3D:1.10.110.10	MapMan:35.2	EntrezGene:4349061	ProteinID:AAP54518.1	ProteinID:AAX95725.1	EMBL:AK063196
ProteinID:BAF26922.1	ProteinID:BAT11567.1	InterPro:Bifun_inhib/LTP/seed_sf	InterPro:Bifunc_inhib/LTP/seed_store	GO:GO:0003674	GO:GO:0003824
GO:GO:0006508	GO:GO:0006810	GO:GO:0006869	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233
GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:Os10g0505700	EnsemblPlants:Os10t0505700-01	PFAM:PF14368	PANTHER:PTHR33214
PANTHER:PTHR33214:SF10	UniProt:Q7G2B5	SMART:SM00499	SUPFAM:SSF47699	SignalP:SignalP-noTM	UniParc:UPI00000AD138
RefSeq:XP_015613799.1	InterPro:nsLTP2	SEG:seg	:	:	:

Description

non-specific lipid transfer protein 2.12, lipid transfer protein 2.12, type 2 non-specific lipid transfer protein 12Similar to Nonspecific lipid-transfer protein 2 (nsLTP2) (7 kDa lipid transfer protein). (Os10t0505700-01)

Coordinates

chr10:-:19335093..19335615

Molecular Weight (calculated)

9282.3 Da

IEP (calculated)

8.989

GRAVY (calculated)

0.442

Length

91 amino acids

Sequence
(BLAST)

1: MAKWAAIMAV LLLAAAWAPA PATAQCNAGQ LAICAGAIIG GSTPSASCCS NLRAQRGCFC QYARNPAYAS YINSANARKT LTSCGIAIPR C

Best Arabidopsis Sequence Match ( AT5G38170.1 )
(BLAST)

001: MKFTALVFIV FVVGVMVSPV SIRATEVKLS GGEADVTCDA VQLSSCATPM LTGVPPSTEC CGKLKEQQPC FCTYIKDPRY SQYVGSANAK KTLATCGVPY
101: PTC

Arabidopsis Description

Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FF39]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.