Factsheet for Os10t0504900-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

extracellular: 21255809
extracellular: 24083427

msms PMID: 21255809 doi

T Shinano, S Komatsu, T Yoshimura, S Tokutake, FJ Kong, T Watanabe, J Wasaki, M Osaki

National Agriculture and Food Research Organization, National Agricultural Research Center for Hokkaido Region, 1-Hitsujigaoka, Toyohira-ku, Sapporo 062-8555, Japan. shinano@affrc.go.jp

msms PMID: 24083427 doi

T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu

Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0504650-00	Rice	endoplasmic reticulum, extracellular, plasma membrane	95.12	78.0
Os10t0505500-01	Rice	extracellular	75.61	65.96
Os10t0505000-01	Rice	extracellular	75.61	62.0
Os10t0505700-01	Rice	extracellular, nucleus, plastid	57.32	51.65
TraesCS1D01G164000.1	Wheat	extracellular	58.54	50.53
TraesCS1B01G189600.1	Wheat	extracellular	58.54	50.53
TraesCS1B01G188600.1	Wheat	extracellular	58.54	50.53
TraesCS1A01G175100.1	Wheat	extracellular	56.1	48.42
Os03t0111300-01	Rice	extracellular	52.44	44.79
Os05t0550300-01	Rice	extracellular	48.78	42.55
VIT_14s0006g02530.t01	Wine grape	plastid	41.46	41.98
Os06t0705400-02	Rice	extracellular, plasma membrane	47.56	41.49
KRH01717	Soybean	extracellular	45.12	38.95
KRH70406	Soybean	extracellular	45.12	38.95
Os05t0550600-02	Rice	extracellular	45.12	38.54
VIT_17s0000g03280.t01	Wine grape	extracellular	42.68	38.04
Solyc03g034390.1.1	Tomato	extracellular	43.9	37.89
KRH39147	Soybean	extracellular	41.46	36.56
Os11t0620300-01	Rice	extracellular	48.78	36.36
VIT_14s0006g02550.t01	Wine grape	extracellular	40.24	35.87
KRH48557	Soybean	extracellular	40.24	35.48
HORVU1Hr1G046370.1	Barley	extracellular	57.32	35.34
PGSC0003DMT400056046	Potato	extracellular	42.68	35.0
Os01t0691100-01	Rice	endoplasmic reticulum, extracellular, mitochondrion	50.0	33.06
KRH56524	Soybean	extracellular	37.8	31.0
KRG93187	Soybean	extracellular	36.59	30.93
KRH33571	Soybean	extracellular	36.59	30.0

Protein Annotations

Gene3D:1.10.110.10	MapMan:35.2	ProteinID:ABB47857.1	ProteinID:BAF26919.1	ProteinID:BAT11564.1	InterPro:Bifun_inhib/LTP/seed_sf
InterPro:Bifunc_inhib/LTP/seed_store	GO:GO:0003674	GO:GO:0003824	GO:GO:0006508	GO:GO:0006810	GO:GO:0006869
GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:Os10g0504900
EnsemblPlants:Os10t0504900-01	PFAM:PF14368	PANTHER:PTHR33214	PANTHER:PTHR33214:SF10	UniProt:Q337E3	SMART:SM00499
SUPFAM:SSF47699	SignalP:SignalP-noTM	UniParc:UPI00005E1F4A	InterPro:nsLTP2	:	:

Description

non-specific lipid transfer protein 2.9, lipid transfer protein 2.9, type 2 non-specific lipid transfer protein 9Similar to Lipid transfer protein. (Os10t0504900-01)

Coordinates

chr10:+:19303783..19304325

Molecular Weight (calculated)

8620.6 Da

IEP (calculated)

7.959

GRAVY (calculated)

0.433

Length

82 amino acids

Sequence
(BLAST)

1: MAKWAAAMEM LLLVVCDPGL LSPCAAPIFF GTAPSASCCS SLKAQQGCFC QYAKDPTYAS YINSTNARKM IAACGIPFPN CS

Best Arabidopsis Sequence Match ( AT5G38170.1 )
(BLAST)

001: MKFTALVFIV FVVGVMVSPV SIRATEVKLS GGEADVTCDA VQLSSCATPM LTGVPPSTEC CGKLKEQQPC FCTYIKDPRY SQYVGSANAK KTLATCGVPY
101: PTC

Arabidopsis Description

Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FF39]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.