Subcellular Localization
min:
: max
Winner_takes_all: extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 6
- golgi 5
- plasma membrane 7
- endoplasmic reticulum 5
- vacuole 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G312800.1 | Wheat | extracellular | 57.45 | 57.45 |
| TraesCS7B01G313000.1 | Wheat | extracellular | 56.38 | 56.38 |
| Zm00001d036452_P001 | Maize | extracellular | 47.87 | 47.87 |
| Os10t0504900-01 | Rice | extracellular | 41.49 | 47.56 |
| Os05t0550300-01 | Rice | extracellular | 44.68 | 44.68 |
| Os10t0505500-01 | Rice | extracellular | 44.68 | 44.68 |
| Os10t0505700-01 | Rice | extracellular, nucleus, plastid | 41.49 | 42.86 |
| VIT_14s0006g02530.t01 | Wine grape | plastid | 36.17 | 41.98 |
| Os10t0505000-01 | Rice | extracellular | 43.62 | 41.0 |
| Os03t0111300-01 | Rice | extracellular | 41.49 | 40.62 |
| Os10t0504650-00 | Rice | endoplasmic reticulum, extracellular, plasma membrane | 42.55 | 40.0 |
| TraesCS7D01G406300.1 | Wheat | endoplasmic reticulum | 57.45 | 39.13 |
| KRH70406 | Soybean | extracellular | 39.36 | 38.95 |
| KRH01717 | Soybean | extracellular | 38.3 | 37.89 |
| VIT_14s0006g02550.t01 | Wine grape | extracellular | 35.11 | 35.87 |
| KRG93187 | Soybean | extracellular | 36.17 | 35.05 |
| Os11t0620300-01 | Rice | extracellular | 40.43 | 34.55 |
| KRH33571 | Soybean | extracellular | 36.17 | 34.0 |
| VIT_17s0000g03280.t01 | Wine grape | extracellular | 32.98 | 33.7 |
| Solyc03g034390.1.1 | Tomato | extracellular | 34.04 | 33.68 |
| Os05t0550600-02 | Rice | extracellular | 32.98 | 32.29 |
| KRH48557 | Soybean | extracellular | 31.91 | 32.26 |
| PGSC0003DMT400056046 | Potato | extracellular | 34.04 | 32.0 |
| KRH39147 | Soybean | extracellular | 30.85 | 31.18 |
| KRH56524 | Soybean | extracellular | 32.98 | 31.0 |
| Os01t0691100-01 | Rice | endoplasmic reticulum, extracellular, mitochondrion | 39.36 | 29.84 |
| OQU77036 | Sorghum | extracellular | 50.0 | 27.98 |
Protein Annotations
| Gene3D:1.10.110.10 | MapMan:35.2 | EntrezGene:4342003 | EMBL:AK062667 | ProteinID:BAD53591.1 | ProteinID:BAD53804.1 |
| ProteinID:BAF20430.1 | ProteinID:BAS99397.1 | InterPro:Bifun_inhib/LTP/seed_sf | GO:GO:0006810 | GO:GO:0006869 | GO:GO:0008150 |
| EnsemblPlantsGene:Os06g0705400 | EnsemblPlants:Os06t0705400-02 | PANTHER:PTHR33214 | PANTHER:PTHR33214:SF4 | UniProt:Q5Z8V0 | SUPFAM:SSF47699 |
| SignalP:SignalP-noTM | UniParc:UPI0000446DCA | RefSeq:XP_015641447.1 | InterPro:nsLTP2 | SEG:seg | : |
Description
non-specific lipid transfer protein 2.6, lipid transfer protein 2.6, type 2 non-specific lipid transfer protein 6Hypothetical conserved gene. (Os06t0705400-01);Similar to Nonspecific lipid-transfer protein 2P (LTP2P) (Lipid transfer protein 2 isoform 2) (LTP2-2) (7 kDa lipid transfer protein 2). (Os06t0705400-02)
Coordinates
chr6:+:29807824..29808449
Molecular Weight (calculated)
9408.4 Da
IEP (calculated)
8.768
GRAVY (calculated)
0.263
Length
94 amino acids
Sequence
(BLAST)
(BLAST)
1: MAGINRKGGA AAAYAVALLL AAGAADAAGC NPSALSPCMS AIMLGAAPSP GCCVQLRAQQ PCLCQYARDP SYRSYVTSPS AQRAVKACNV KANC
001: MSKTTTHQKH ISINSETNKR SRRNMVMIKT TMVSLFALAA VLLMILAPAA EAVTCSPMQL SPCATAITSS SPPSALCCAK LKEQRPCLCG YMRNPSLRRF
101: VSTPNARKVS KSCKLPIPRC
101: VSTPNARKVS KSCKLPIPRC
Arabidopsis Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LP30]
SUBAcon: [extracellular,plasma membrane,endoplasmic reticulum,plastid]
SUBAcon: [extracellular,plasma membrane,endoplasmic reticulum,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.