Factsheet for Os11t0620300-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 5
plasma membrane 7
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

extracellular: 19226311
plastid: 27992503

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

msms PMID: 19226311 doi

WK Cho, XY Chen, H Chu, Y Rim, S Kim, ST Kim, SW Kim, ZY Park, JY Kim

Division of Applied Life Science (BK21 Program), Graduate School, Environmental Biotechnology National Core Research Center, PMBBRC, Gyeongsang National University, Jinju, Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d007299_P001	Maize	extracellular	57.27	63.64
Os10t0504900-01	Rice	extracellular	36.36	48.78
Os10t0504650-00	Rice	endoplasmic reticulum, extracellular, plasma membrane	37.27	41.0
Os06t0705400-02	Rice	extracellular, plasma membrane	34.55	40.43
Os10t0505700-01	Rice	extracellular, nucleus, plastid	32.73	39.56
Os10t0505000-01	Rice	extracellular	35.45	39.0
Os10t0505500-01	Rice	extracellular	32.73	38.3
Os03t0111300-01	Rice	extracellular	32.73	37.5
VIT_14s0006g02530.t01	Wine grape	plastid	27.27	37.04
Os05t0550600-02	Rice	extracellular	31.82	36.46
Solyc03g034390.1.1	Tomato	extracellular	30.91	35.79
Os05t0550300-01	Rice	extracellular	29.09	34.04
KRH01717	Soybean	extracellular	29.09	33.68
KRH70406	Soybean	extracellular	29.09	33.68
KRH48557	Soybean	extracellular	28.18	33.33
PGSC0003DMT400056046	Potato	extracellular	30.0	33.0
VIT_17s0000g03280.t01	Wine grape	extracellular	27.27	32.61
KRH39147	Soybean	extracellular	27.27	32.26
KRG93187	Soybean	extracellular	27.27	30.93
KRH33571	Soybean	extracellular	27.27	30.0
Os01t0691100-01	Rice	endoplasmic reticulum, extracellular, mitochondrion	33.64	29.84
KRH56524	Soybean	extracellular	26.36	29.0
VIT_14s0006g02550.t01	Wine grape	extracellular	22.73	27.17

Protein Annotations

Gene3D:1.10.110.10	MapMan:35.2	EntrezGene:4350941	ProteinID:ABA94775.1	EMBL:AK107901	ProteinID:BAF28656.1
ProteinID:BAT14900.1	InterPro:Bifun_inhib/LTP/seed_sf	InterPro:Bifunc_inhib/LTP/seed_store	ProteinID:EEE52484.1	GO:GO:0006810	GO:GO:0006869
GO:GO:0008150	EnsemblPlantsGene:Os11g0620300	EnsemblPlants:Os11t0620300-01	PFAM:PF00234	PANTHER:PTHR33214	PANTHER:PTHR33214:SF10
UniProt:Q2R132	SMART:SM00499	SUPFAM:SSF47699	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0000681E57
RefSeq:XP_015616567.1	InterPro:nsLTP2	SEG:seg	:	:	:

Description

non-specific lipid transfer protein 2.13, lipid transfer protein 2.13, type 2 non-specific lipid transfer protein 13Similar to Nonspecific lipid-transfer protein 2 (LTP 2). (Os11t0620300-01)

Coordinates

chr11:+:24180911..24181379

Molecular Weight (calculated)

11265.1 Da

IEP (calculated)

8.763

GRAVY (calculated)

0.570

Length

110 amino acids

Sequence
(BLAST)

001: MMMGKSSPST SPVYAVAAAL LLVYLMVAMG AGVVEAAVVP PSRCNPTLLT PCAGPALFGG PVPPACCAQL RAQAACLCAY ARSPNYGSYI RSPNARRLFA
101: VCGLPMPQCS

Best Arabidopsis Sequence Match ( AT1G73780.1 )
(BLAST)

1: MKGSCTKPVF FTCTILLILI VAQENRVAAV DPCNPAQLSP CLETIMKGSE PSDLCCSKVK EQQHCICQYL KNPNFKSFLN SPNAKIIATD CHCPYPKC

Arabidopsis Description

Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C9T4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.