Factsheet for Os03t0111300-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

extracellular: 19038476
extracellular: 19226311
plastid: 27992503

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

msms PMID: 19226311 doi

WK Cho, XY Chen, H Chu, Y Rim, S Kim, ST Kim, SW Kim, ZY Park, JY Kim

Division of Applied Life Science (BK21 Program), Graduate School, Environmental Biotechnology National Core Research Center, PMBBRC, Gyeongsang National University, Jinju, Korea.

msms PMID: 19038476 doi

XY Chen, ST Kim, WK Cho, Y Rim, S Kim, SW Kim, KY Kang, ZY Park, JY Kim

Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju 660-701, Republic of Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G554400.1	Wheat	extracellular, plastid	43.75	65.62
TraesCS3D01G023400.1	Wheat	plastid	51.04	58.33
TraesCSU01G033100.1	Wheat	extracellular	47.92	56.79
Zm00001d027332_P001	Maize	extracellular	57.29	56.12
Os10t0505700-01	Rice	extracellular, nucleus, plastid	53.12	56.04
TraesCS5B01G531100.1	Wheat	extracellular, unclear	51.04	53.26
HORVU4Hr1G089490.1	Barley	extracellular	50.0	52.75
Os10t0504900-01	Rice	extracellular	44.79	52.44
TraesCS4B01G393400.1	Wheat	extracellular	51.04	52.13
TraesCSU01G032900.1	Wheat	unclear	52.08	52.08
TraesCS5A01G554300.1	Wheat	extracellular	52.08	52.08
TraesCS4B01G393300.1	Wheat	extracellular, unclear	52.08	52.08
TraesCSU01G033800.1	Wheat	extracellular	50.0	51.61
TraesCS4B01G392800.1	Wheat	extracellular	50.0	51.61
TraesCS3B01G022200.1	Wheat	extracellular	52.08	51.02
TraesCS5B01G531200.1	Wheat	extracellular, vacuole	52.08	51.02
TraesCSU01G033000.1	Wheat	extracellular	47.92	50.55
TraesCSU01G032800.1	Wheat	extracellular	50.0	50.53
KRH01717	Soybean	extracellular	48.96	49.47
Os10t0504650-00	Rice	endoplasmic reticulum, extracellular, plasma membrane	50.0	48.0
Os10t0505500-01	Rice	extracellular	46.88	47.87
OQU93402	Sorghum	cytosol	60.42	46.03
Os10t0505000-01	Rice	extracellular	46.88	45.0
HORVU4Hr1G089500.1	Barley	extracellular	44.79	43.0
Os05t0550600-02	Rice	extracellular	42.71	42.71
Os06t0705400-02	Rice	extracellular, plasma membrane	40.62	41.49
Os05t0550300-01	Rice	extracellular	40.62	41.49
KRH70406	Soybean	extracellular	40.62	41.05
VIT_14s0006g02530.t01	Wine grape	plastid	32.29	38.27
KRG93187	Soybean	extracellular	36.46	36.08
VIT_17s0000g03280.t01	Wine grape	extracellular	34.38	35.87
KRH56524	Soybean	extracellular	35.42	34.0
Os11t0620300-01	Rice	extracellular	37.5	32.73
VIT_14s0006g02550.t01	Wine grape	extracellular	31.25	32.61
KRH39147	Soybean	extracellular	31.25	32.26
KRH33571	Soybean	extracellular	33.33	32.0
PGSC0003DMT400056046	Potato	extracellular	32.29	31.0
Os01t0691100-01	Rice	endoplasmic reticulum, extracellular, mitochondrion	39.58	30.65
Solyc03g034390.1.1	Tomato	extracellular	30.21	30.53
KRH48557	Soybean	extracellular	29.17	30.11

Protein Annotations

Gene3D:1.10.110.10	PDB:1L6H	MapMan:35.1	EntrezGene:4331362	ProteinID:ABF93598.1	EMBL:AK062506
ProteinID:BAF10637.1	ProteinID:BAS81929.1	InterPro:Bifun_inhib/LTP/seed_sf	InterPro:Bifunc_inhib/LTP/seed_store	ProteinID:EAZ25324.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0006810	GO:GO:0006869	GO:GO:0008150	GO:GO:0008289	EnsemblPlantsGene:Os03g0111300
EnsemblPlants:Os03t0111300-01	PFAM:PF14368	PFscan:PS51257	PANTHER:PTHR33214	PANTHER:PTHR33214:SF18	UniProt:Q10ST8
SUPFAM:SSF47699	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0000D7C25C	RefSeq:XP_015629253.1	InterPro:nsLTP2
SEG:seg	:	:	:	:	:

Description

LIPID TRANSFER PROTEIN 2Nonspecific lipid-transfer protein 2 (nsLTP2) (7 kDa lipid transfer protein). (Os03t0111300-01)

Coordinates

chr3:-:652323..652798

Molecular Weight (calculated)

9535.8 Da

IEP (calculated)

9.056

GRAVY (calculated)

0.511

Length

96 amino acids

Sequence
(BLAST)

1: MMRKLAVLVL AVAMVAACGG GVVGVAGAGC NAGQLTVCTG AIAGGARPTA ACCSSLRAQQ GCFCQFAKDP RYGRYVNSPN ARKAVSSCGI ALPTCH

Best Arabidopsis Sequence Match ( AT1G66850.1 )
(BLAST)

001: MKIVTLVLVV FVILSTSFPA AIKAEDTGDT GNVGVTCDAR QLQPCLAAIT GGGQPSGACC AKLTEQQSCL CGFAKNPAFA QYISSPNARK VLLACNVAYP
101: TC

Arabidopsis Description

At1g66850 [Source:UniProtKB/TrEMBL;Acc:Q9C9N7]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.