Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G032900.1 | Wheat | unclear | 94.79 | 94.79 |
| TraesCS4B01G393300.1 | Wheat | extracellular, unclear | 93.75 | 93.75 |
| TraesCS5B01G531200.1 | Wheat | extracellular, vacuole | 91.67 | 89.8 |
| TraesCS5A01G554400.1 | Wheat | extracellular, plastid | 51.04 | 76.56 |
| HORVU4Hr1G089500.1 | Barley | extracellular | 67.71 | 65.0 |
| TraesCS1A01G175200.1 | Wheat | extracellular, plastid | 50.0 | 56.47 |
| Zm00001d027332_P001 | Maize | extracellular | 57.29 | 56.12 |
| Os03t0111300-01 | Rice | extracellular | 52.08 | 52.08 |
| TraesCS1A01G175100.1 | Wheat | extracellular | 48.96 | 49.47 |
| OQU93402 | Sorghum | cytosol | 54.17 | 41.27 |
| KRH01717 | Soybean | extracellular | 39.58 | 40.0 |
| VIT_14s0006g02530.t01 | Wine grape | plastid | 33.33 | 39.51 |
| KRH70406 | Soybean | extracellular | 38.54 | 38.95 |
| TraesCS1A01G374300.1 | Wheat | extracellular | 38.54 | 38.54 |
| TraesCS4A01G424000.1 | Wheat | extracellular | 34.38 | 37.08 |
| TraesCS4A01G424100.1 | Wheat | extracellular | 34.38 | 37.08 |
| TraesCS4A01G424200.1 | Wheat | extracellular | 34.38 | 37.08 |
| TraesCS1A01G374200.1 | Wheat | extracellular | 36.46 | 36.46 |
| TraesCS1A01G374500.1 | Wheat | extracellular | 36.46 | 36.08 |
| VIT_17s0000g03280.t01 | Wine grape | extracellular | 34.38 | 35.87 |
| Solyc03g034390.1.1 | Tomato | extracellular | 35.42 | 35.79 |
| TraesCS3A01G261600.1 | Wheat | extracellular | 35.42 | 35.79 |
| TraesCS1A01G374400.1 | Wheat | extracellular | 35.42 | 34.69 |
| VIT_14s0006g02550.t01 | Wine grape | extracellular | 32.29 | 33.7 |
| KRH48557 | Soybean | extracellular | 32.29 | 33.33 |
| KRH39147 | Soybean | extracellular | 32.29 | 33.33 |
| PGSC0003DMT400056046 | Potato | extracellular | 34.38 | 33.0 |
| KRH56524 | Soybean | extracellular | 32.29 | 31.0 |
| KRH33571 | Soybean | extracellular | 31.25 | 30.0 |
| KRG93187 | Soybean | extracellular | 30.21 | 29.9 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G554300.1 | EnsemblPlantsGene:TraesCS5A01G554300 | Gene3D:1.10.110.10 | GO:GO:0006810 | GO:GO:0006869 | GO:GO:0008150 |
| InterPro:Bifun_inhib/LTP/seed_sf | InterPro:Bifunc_inhib/LTP/seed_store | InterPro:nsLTP2 | PANTHER:PTHR33214 | PANTHER:PTHR33214:SF18 | PFAM:PF14368 |
| SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF47699 | TIGR:cd01959 | TMHMM:TMhelix | MapMan:35.1 |
Description
No Description!
Coordinates
chr5A:+:706270547..706271093
Molecular Weight (calculated)
9704.9 Da
IEP (calculated)
8.212
GRAVY (calculated)
0.319
Length
96 amino acids
Sequence
(BLAST)
(BLAST)
1: MAGMGKQPVV AALMLALVVL AAAPGGAHAA CQASQLAVCA SAILSGAKPS GECCGNLRAQ QGCFCQYAKD PTYGQYIRSP HARDTLQSCG LAVPHC
001: MKFTGVVFIL FVLGTMLSPV PVKARVVKGS GEEVNVTCDA TQLSSCVTAV STGAPPSTDC CGKLKEHETC LCTYIQNPLY SSYVTSPNAR KTLAACDVAY
101: PTC
101: PTC
Arabidopsis Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FF40]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.