Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G189600.1 | Wheat | extracellular | 95.79 | 95.79 |
| TraesCS1B01G188600.1 | Wheat | extracellular | 95.79 | 95.79 |
| TraesCS1D01G164000.1 | Wheat | extracellular | 95.79 | 95.79 |
| HORVU1Hr1G046370.1 | Barley | extracellular | 91.58 | 65.41 |
| Os10t0504900-01 | Rice | extracellular | 48.42 | 56.1 |
| TraesCS5A01G554400.1 | Wheat | extracellular, plastid | 35.79 | 53.12 |
| TraesCS1A01G175200.1 | Wheat | extracellular, plastid | 47.37 | 52.94 |
| TraesCS5A01G554300.1 | Wheat | extracellular | 49.47 | 48.96 |
| Os10t0504650-00 | Rice | endoplasmic reticulum, extracellular, plasma membrane | 50.53 | 48.0 |
| Os10t0505500-01 | Rice | extracellular | 44.21 | 44.68 |
| Os10t0505000-01 | Rice | extracellular | 45.26 | 43.0 |
| TraesCS1A01G374300.1 | Wheat | extracellular | 43.16 | 42.71 |
| KRH70406 | Soybean | extracellular | 42.11 | 42.11 |
| KRH01717 | Soybean | extracellular | 40.0 | 40.0 |
| VIT_14s0006g02530.t01 | Wine grape | plastid | 33.68 | 39.51 |
| TraesCS1A01G374200.1 | Wheat | extracellular | 38.95 | 38.54 |
| TraesCS1A01G374500.1 | Wheat | extracellular | 37.89 | 37.11 |
| TraesCS4A01G424100.1 | Wheat | extracellular | 34.74 | 37.08 |
| TraesCS4A01G424000.1 | Wheat | extracellular | 34.74 | 37.08 |
| TraesCS4A01G424200.1 | Wheat | extracellular | 34.74 | 37.08 |
| VIT_17s0000g03280.t01 | Wine grape | extracellular | 35.79 | 36.96 |
| TraesCS1A01G374400.1 | Wheat | extracellular | 37.89 | 36.73 |
| KRH33571 | Soybean | extracellular | 36.84 | 35.0 |
| VIT_14s0006g02550.t01 | Wine grape | extracellular | 33.68 | 34.78 |
| Solyc03g034390.1.1 | Tomato | extracellular | 34.74 | 34.74 |
| KRG93187 | Soybean | extracellular | 34.74 | 34.02 |
| PGSC0003DMT400056046 | Potato | extracellular | 35.79 | 34.0 |
| KRH56524 | Soybean | extracellular | 35.79 | 34.0 |
| TraesCS3A01G261600.1 | Wheat | extracellular | 33.68 | 33.68 |
| KRH39147 | Soybean | extracellular | 32.63 | 33.33 |
| KRH48557 | Soybean | extracellular | 31.58 | 32.26 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G175100.1 | EnsemblPlantsGene:TraesCS1A01G175100 | Gene3D:1.10.110.10 | GO:GO:0006810 | GO:GO:0006869 | GO:GO:0008150 |
| InterPro:Bifun_inhib/LTP/seed_sf | InterPro:Bifunc_inhib/LTP/seed_store | InterPro:nsLTP2 | PANTHER:PTHR33214 | PANTHER:PTHR33214:SF10 | PFAM:PF14368 |
| SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF47699 | TIGR:cd01959 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr1A:-:313006783..313007070
Molecular Weight (calculated)
9501.7 Da
IEP (calculated)
8.322
GRAVY (calculated)
0.553
Length
95 amino acids
Sequence
(BLAST)
(BLAST)
1: MARVAAVAMC ALLALVVVGP PSVAAQDCDA GKLIVCAAAI IGGAEPSASC CTNLKAQRGC LCKYASNPAY SGYINSPTTR KTLASCGIPI PTCPQ
001: MKIVTLVLVV FVILSTSFPA AIKAEDTGDT GNVGVTCDAR QLQPCLAAIT GGGQPSGACC AKLTEQQSCL CGFAKNPAFA QYISSPNARK VLLACNVAYP
101: TC
101: TC
Arabidopsis Description
At1g66850 [Source:UniProtKB/TrEMBL;Acc:Q9C9N7]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.