Factsheet for TraesCS1A01G374200.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
golgi 4
plasma membrane 4
endoplasmic reticulum 4
vacuole 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G380800.1	Wheat	extracellular	96.88	96.88
HORVU1Hr1G083160.1	Barley	extracellular	94.79	94.79
TraesCS1B01G394100.1	Wheat	extracellular	94.79	94.79
TraesCS1B01G394400.1	Wheat	extracellular	94.79	94.79
TraesCS1A01G374300.1	Wheat	extracellular	82.29	82.29
Os05t0550300-01	Rice	extracellular	68.75	70.21
EES18625	Sorghum	extracellular	68.75	68.04
Zm00001d038911_P001	Maize	extracellular	68.75	65.35
Zm00001d037677_P001	Maize	endoplasmic reticulum, plasma membrane	68.75	65.35
TraesCS1A01G374500.1	Wheat	extracellular	52.08	51.55
TraesCS1A01G374400.1	Wheat	extracellular	51.04	50.0
VIT_14s0006g02530.t01	Wine grape	plastid	40.62	48.15
GSMUA_Achr9P18720_001	Banana	extracellular	42.71	45.05
GSMUA_Achr2P06400_001	Banana	extracellular	42.71	45.05
VIT_17s0000g03280.t01	Wine grape	extracellular	42.71	44.57
KRH48557	Soybean	extracellular	42.71	44.09
TraesCS5A01G554400.1	Wheat	extracellular, plastid	29.17	43.75
KRH39147	Soybean	extracellular	41.67	43.01
KRH01717	Soybean	extracellular	41.67	42.11
GSMUA_Achr9P21450_001	Banana	endoplasmic reticulum, plasma membrane, plastid	44.79	39.81
CDY52889	Canola	extracellular	39.58	39.58
TraesCS1A01G175100.1	Wheat	extracellular	38.54	38.95
AT5G38170.1	Thale cress	extracellular	41.67	38.84
KRH33571	Soybean	extracellular	39.58	38.0
KRH70406	Soybean	extracellular	37.5	37.89
Bra040627.1-P	Field mustard	extracellular	37.5	37.89
CDY50600	Canola	extracellular	38.54	37.76
TraesCS1A01G175200.1	Wheat	extracellular, plastid	33.33	37.65
Bra028162.1-P	Field mustard	extracellular	39.58	37.25
TraesCS3A01G261600.1	Wheat	extracellular	36.46	36.84
CDY12591	Canola	extracellular	37.5	36.73
TraesCS5A01G554300.1	Wheat	extracellular	36.46	36.46
KRG93187	Soybean	extracellular	36.46	36.08
VIT_14s0006g02550.t01	Wine grape	extracellular	34.38	35.87
AT1G66850.1	Thale cress	extracellular	37.5	35.29
AT1G07747.1	Thale cress	extracellular	34.38	34.74
AT5G38160.1	Thale cress	extracellular	36.46	33.98
AT1G43666.1	Thale cress	extracellular	33.33	33.33
AT3G57310.1	Thale cress	extracellular	35.42	33.01
KRH56524	Soybean	extracellular	34.38	33.0
AT5G38195.1	Thale cress	extracellular	32.29	32.63
AT2G14846.1	Thale cress	extracellular	33.33	32.32
CDY61300	Canola	extracellular	32.29	31.96
Bra030699.1-P	Field mustard	extracellular	32.29	31.96
CDY15628	Canola	extracellular	32.29	31.96
TraesCS4A01G424000.1	Wheat	extracellular	29.17	31.46
TraesCS4A01G424100.1	Wheat	extracellular	29.17	31.46
TraesCS4A01G424200.1	Wheat	extracellular	29.17	31.46
CDX93626	Canola	extracellular	32.29	31.31
Bra008375.1-P	Field mustard	extracellular	31.25	30.93
Bra027114.1-P	Field mustard	extracellular	31.25	30.93
CDY12874	Canola	extracellular	31.25	30.93
CDY40472	Canola	extracellular	31.25	30.93
CDY26874	Canola	extracellular	31.25	30.93
CDY61301	Canola	extracellular	33.33	30.48
CDX95131	Canola	extracellular	31.25	30.3
AT1G43667.1	Thale cress	extracellular	30.21	29.59
CDY15627	Canola	extracellular	32.29	29.52
AT4G12825.1	Thale cress	extracellular	29.17	29.47
Bra018687.1-P	Field mustard	extracellular	29.17	28.28
CDX93624	Canola	extracellular	29.17	28.28
CDX95132	Canola	extracellular	29.17	28.28
CDY01688	Canola	plastid	38.54	28.03
Bra033084.1-P	Field mustard	extracellular	29.17	28.0
AT5G38180.1	Thale cress	extracellular	27.08	27.37
CDY70822	Canola	extracellular	28.12	26.47
CDY04056	Canola	extracellular	27.08	25.74
AT5G38197.1	Thale cress	extracellular	25.0	25.0
AT1G43665.1	Thale cress	extracellular	28.12	21.95
CDY44406	Canola	extracellular	31.25	16.22
Bra033087.1-P	Field mustard	extracellular	31.25	14.71

Protein Annotations

EnsemblPlants:TraesCS1A01G374200.1	EnsemblPlantsGene:TraesCS1A01G374200	Gene3D:1.10.110.10	GO:GO:0006810	GO:GO:0006869	GO:GO:0008150
InterPro:Bifun_inhib/LTP/seed_sf	InterPro:Bifunc_inhib/LTP/seed_store	InterPro:nsLTP2	PANTHER:PTHR33214	PANTHER:PTHR33214:SF5	PFAM:PF14368
SEG:seg	SignalP:SignalP-noTM	SMART:SM00499	SUPFAM:SSF47699	TIGR:cd01959	TMHMM:TMhelix
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr1A:+:549637965..549638255

Molecular Weight (calculated)

9895.3 Da

IEP (calculated)

8.397

GRAVY (calculated)

0.392

Length

96 amino acids

Sequence
(BLAST)

1: MKYLGQVVVA LLAFSAVVLM VAPAGAEAAT CNALQLTPCA GAIIGSAAPT ASCCSKMKEQ QPCMCQYARD PNLKQYVDSP NGKKVMAACK VPVPSC

Best Arabidopsis Sequence Match ( AT3G18280.2 )
(BLAST)

001: MSKTTTHQKH ISINSETNKR SRRNMVMIKT TMVSLFALAA VLLMILAPAA EAVTCSPMQL SPCATAITSS SPPSALCCAK LKEQRPCLCG YMRNPSLRRF
101: VSTPNARKVS KSCKLPIPRC

Arabidopsis Description

Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LP30]
SUBAcon: [extracellular,plasma membrane,endoplasmic reticulum,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.