Factsheet for Zm00001d037677_P001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 5
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES18625	Sorghum	extracellular	85.15	88.66
Zm00001d038911_P001	Maize	extracellular	87.13	87.13
HORVU0Hr1G001480.2	Barley	cytosol	35.64	75.0
Os05t0550300-01	Rice	extracellular	69.31	74.47
TraesCS1A01G374200.1	Wheat	extracellular	65.35	68.75
TraesCS1B01G394100.1	Wheat	extracellular	64.36	67.71
TraesCS1D01G380800.1	Wheat	extracellular	64.36	67.71
TraesCS1A01G374300.1	Wheat	extracellular	62.38	65.62
HORVU1Hr1G083160.1	Barley	extracellular	62.38	65.62
HORVU1Hr1G083170.1	Barley	extracellular	62.38	65.62
TraesCS1B01G394400.1	Wheat	extracellular	62.38	65.62
TraesCS1B01G394500.1	Wheat	extracellular	62.38	65.62
TraesCS1D01G381100.1	Wheat	extracellular	62.38	65.62
Zm00001d038913_P001	Maize	endoplasmic reticulum, extracellular	47.52	48.98
VIT_14s0006g02530.t01	Wine grape	plastid	38.61	48.15
GSMUA_Achr2P06400_001	Banana	extracellular	40.59	45.05
VIT_17s0000g03280.t01	Wine grape	extracellular	40.59	44.57
Zm00001d027332_P001	Maize	extracellular	42.57	43.88
CDY52889	Canola	extracellular	40.59	42.71
KRH70406	Soybean	extracellular	39.6	42.11
KRH01717	Soybean	extracellular	39.6	42.11
GSMUA_Achr9P18720_001	Banana	extracellular	37.62	41.76
GSMUA_Achr9P21450_001	Banana	endoplasmic reticulum, plasma membrane, plastid	44.55	41.67
Bra040627.1-P	Field mustard	extracellular	38.61	41.05
CDY50600	Canola	extracellular	39.6	40.82
Zm00001d013907_P001	Maize	plastid	38.61	40.62
AT5G38170.1	Thale cress	extracellular	40.59	39.81
CDY12591	Canola	extracellular	38.61	39.8
KRH48557	Soybean	extracellular	36.63	39.78
VIT_14s0006g02550.t01	Wine grape	extracellular	35.64	39.13
AT1G66850.1	Thale cress	extracellular	38.61	38.24
Zm00001d007299_P001	Maize	extracellular	36.63	37.37
KRH33571	Soybean	extracellular	36.63	37.0
AT5G38160.1	Thale cress	extracellular	37.62	36.89
KRH39147	Soybean	extracellular	33.66	36.56
Bra028162.1-P	Field mustard	extracellular	36.63	36.27
Zm00001d036452_P001	Maize	extracellular	33.66	36.17
KRG93187	Soybean	extracellular	34.65	36.08
Zm00001d052759_P001	Maize	extracellular	34.65	36.08
CDY15628	Canola	extracellular	33.66	35.05
Bra030699.1-P	Field mustard	extracellular	33.66	35.05
AT1G43666.1	Thale cress	extracellular	32.67	34.38
CDY61300	Canola	extracellular	32.67	34.02
CDY40472	Canola	extracellular	32.67	34.02
CDY12874	Canola	extracellular	32.67	34.02
Bra027114.1-P	Field mustard	extracellular	32.67	34.02
KRH56524	Soybean	extracellular	33.66	34.0
AT3G57310.1	Thale cress	extracellular	34.65	33.98
AT1G07747.1	Thale cress	extracellular	31.68	33.68
CDY61301	Canola	extracellular	34.65	33.33
AT2G14846.1	Thale cress	extracellular	32.67	33.33
CDY15627	Canola	extracellular	33.66	32.38
CDY70822	Canola	extracellular	32.67	32.35
Bra033084.1-P	Field mustard	extracellular	31.68	32.0
CDY26874	Canola	extracellular	30.69	31.96
Bra008375.1-P	Field mustard	extracellular	30.69	31.96
AT5G38195.1	Thale cress	extracellular	29.7	31.58
CDX95132	Canola	extracellular	30.69	31.31
Bra018687.1-P	Field mustard	extracellular	30.69	31.31
AT1G43667.1	Thale cress	extracellular	29.7	30.61
CDX95131	Canola	extracellular	29.7	30.3
CDX93624	Canola	extracellular	29.7	30.3
CDX93626	Canola	extracellular	29.7	30.3
AT4G12825.1	Thale cress	extracellular	27.72	29.47
CDY04056	Canola	extracellular	28.71	28.71
CDY01688	Canola	plastid	35.64	27.27
AT5G38180.1	Thale cress	extracellular	24.75	26.32
AT1G43665.1	Thale cress	extracellular	30.69	25.2
AT5G38197.1	Thale cress	extracellular	22.77	23.96
CDY44406	Canola	extracellular	34.65	18.92
Bra033087.1-P	Field mustard	extracellular	34.65	17.16

Protein Annotations

Gene3D:1.10.110.10	EntrezGene:100281901	MapMan:35.2	ProteinID:AQK84556.1	UniProt:B6SZZ6	EMBL:BT064161
InterPro:Bifun_inhib/LTP/seed_sf	InterPro:Bifunc_inhib/LTP/seed_store	EMBL:EU958311	GO:GO:0006810	GO:GO:0006869	GO:GO:0008150
PANTHER:PTHR33214	PANTHER:PTHR33214:SF5	SMART:SM00499	SUPFAM:SSF47699	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI000182BDF2	EnsemblPlantsGene:Zm00001d037677	EnsemblPlants:Zm00001d037677_P001	EnsemblPlants:Zm00001d037677_T001	InterPro:nsLTP2	SEG:seg

Description

Non-specific lipid-transfer protein 2

Coordinates

chr6:-:133754895..133755200

Molecular Weight (calculated)

10402.8 Da

IEP (calculated)

8.667

GRAVY (calculated)

0.325

Length

101 amino acids

Sequence
(BLAST)

001: MTKPSQVLLA ALAAWAVVLL LLCAAAPRGA DAATACDATQ LTPCAGAIII GRSPSAACCS RLKEQQPCLC TYARDPNLQR YVNSPNGKKA MAACKVPVPS
101: C

Best Arabidopsis Sequence Match ( AT3G18280.2 )
(BLAST)

001: MSKTTTHQKH ISINSETNKR SRRNMVMIKT TMVSLFALAA VLLMILAPAA EAVTCSPMQL SPCATAITSS SPPSALCCAK LKEQRPCLCG YMRNPSLRRF
101: VSTPNARKVS KSCKLPIPRC

Arabidopsis Description

Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LP30]
SUBAcon: [endoplasmic reticulum,plastid,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.