Factsheet for Bra040627.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	extracellular
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY12591	Canola	extracellular	100.0	96.94
AT1G66850.1	Thale cress	extracellular	74.74	69.61
HORVU0Hr1G001480.2	Barley	cytosol	25.26	50.0
Bra030699.1-P	Field mustard	extracellular	47.37	46.39
Os05t0550300-01	Rice	extracellular	43.16	43.62
Bra018687.1-P	Field mustard	extracellular	45.26	43.43
Bra008375.1-P	Field mustard	extracellular	44.21	43.3
Bra027114.1-P	Field mustard	extracellular	44.21	43.3
Bra028162.1-P	Field mustard	extracellular	46.32	43.14
GSMUA_Achr2P06400_001	Banana	extracellular	41.05	42.86
Bra001701.1-P	Field mustard	extracellular	42.11	41.67
Bra022308.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	42.11	41.67
Bra021299.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	42.11	41.24
GSMUA_Achr9P18720_001	Banana	extracellular	37.89	39.56
EES18625	Sorghum	extracellular	40.0	39.18
Zm00001d037677_P001	Maize	endoplasmic reticulum, plasma membrane	41.05	38.61
TraesCS1B01G394100.1	Wheat	extracellular	38.95	38.54
Bra032265.1-P	Field mustard	extracellular	38.95	38.14
TraesCS1A01G374500.1	Wheat	extracellular	38.95	38.14
GSMUA_Achr9P21450_001	Banana	endoplasmic reticulum, plasma membrane, plastid	43.16	37.96
TraesCS1D01G381300.1	Wheat	extracellular	38.95	37.76
TraesCS1A01G374400.1	Wheat	extracellular	38.95	37.76
TraesCS1D01G381100.1	Wheat	extracellular	37.89	37.5
TraesCS1D01G380800.1	Wheat	extracellular	37.89	37.5
TraesCS1B01G394500.1	Wheat	extracellular	37.89	37.5
TraesCS1B01G394400.1	Wheat	extracellular	37.89	37.5
TraesCS1A01G374300.1	Wheat	extracellular	37.89	37.5
TraesCS1A01G374200.1	Wheat	extracellular	37.89	37.5
Os05t0550600-02	Rice	extracellular	37.89	37.5
TraesCS1B01G394700.1	Wheat	extracellular	37.89	37.11
TraesCS3D01G261600.1	Wheat	extracellular	36.84	36.84
Zm00001d038911_P001	Maize	extracellular	38.95	36.63
HORVU1Hr1G083170.1	Barley	extracellular	36.84	36.46
HORVU1Hr1G083160.1	Barley	extracellular	36.84	36.46
Bra014154.1-P	Field mustard	extracellular	36.84	36.08
TraesCS3A01G261600.1	Wheat	extracellular	35.79	35.79
TraesCS1D01G381200.1	Wheat	extracellular	36.84	35.71
EES18626	Sorghum	extracellular	38.95	35.58
Bra015966.1-P	Field mustard	extracellular	35.79	35.05
TraesCS1D01G381600.1	Wheat	extracellular	35.79	34.69
Bra008112.1-P	Field mustard	extracellular	35.79	34.69
Bra033084.1-P	Field mustard	extracellular	35.79	34.0
Zm00001d038913_P001	Maize	endoplasmic reticulum, extracellular	34.74	33.67
TraesCS3B01G294800.1	Wheat	extracellular	33.68	33.33
Os01t0691100-01	Rice	endoplasmic reticulum, extracellular, mitochondrion	42.11	32.26
HORVU1Hr1G083210.1	Barley	plastid	38.95	29.84
HORVU1Hr1G083180.1	Barley	endoplasmic reticulum, extracellular	37.89	29.27
TraesCS1B01G394600.1	Wheat	plastid	33.68	22.22
Bra033087.1-P	Field mustard	extracellular	37.89	17.65

Protein Annotations

EnsemblPlants:Bra040627.1	EnsemblPlants:Bra040627.1-P	EnsemblPlantsGene:Bra040627	Gene3D:1.10.110.10	GO:GO:0006810	GO:GO:0006869
GO:GO:0008150	InterPro:Bifun_inhib/LTP/seed_sf	InterPro:Bifunc_inhib/LTP/seed_store	InterPro:nsLTP2	PANTHER:PTHR33214	PFAM:PF14368
SignalP:SignalP-noTM	SMART:SM00499	SUPFAM:SSF47699	UniParc:UPI0002545B2C	UniProt:M4FHP9	MapMan:35.2

Description

AT1G66850 (E=7e-036) | protease inhibitor/seed storage/lipid transfer protein (LTP) family protein

Coordinates

chrA02:+:9923892..9924179

Molecular Weight (calculated)

9979.2 Da

IEP (calculated)

6.184

GRAVY (calculated)

0.237

Length

95 amino acids

Sequence
(BLAST)

1: MVLTLMVFVI LLTLFPAPNE AADTNVEAAC DPKQLQPCLA AITGGGQPSG DCCAKLKEQQ PCLCGFSKNP AFAQYISSPN SRKVLTACGI PYPSC

Best Arabidopsis Sequence Match ( AT1G66850.1 )
(BLAST)

001: MKIVTLVLVV FVILSTSFPA AIKAEDTGDT GNVGVTCDAR QLQPCLAAIT GGGQPSGACC AKLTEQQSCL CGFAKNPAFA QYISSPNARK VLLACNVAYP
101: TC

Arabidopsis Description

At1g66850 [Source:UniProtKB/TrEMBL;Acc:Q9C9N7]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.