Factsheet for Bra001701.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
golgi 5
plasma membrane 7
endoplasmic reticulum 5
vacuole 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	extracellular
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51937	Canola	extracellular	96.88	96.88
CDX75963	Canola	extracellular	94.79	94.79
Bra022308.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	83.33	83.33
Bra021299.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	80.21	79.38
Bra032265.1-P	Field mustard	extracellular	64.58	63.92
Bra014154.1-P	Field mustard	extracellular	59.38	58.76
VIT_14s0006g02530.t01	Wine grape	plastid	42.71	50.62
PGSC0003DMT400056028	Potato	extracellular	47.92	50.0
KRH01717	Soybean	extracellular	48.96	49.47
Solyc02g086310.1.1	Tomato	extracellular	47.92	48.94
PGSC0003DMT400067824	Potato	extracellular	47.92	48.94
KRH70406	Soybean	extracellular	46.88	47.37
Bra040627.1-P	Field mustard	extracellular	41.67	42.11
VIT_14s0006g02550.t01	Wine grape	extracellular	39.58	41.3
Bra030699.1-P	Field mustard	extracellular	38.54	38.14
Bra015966.1-P	Field mustard	extracellular	38.54	38.14
Bra028162.1-P	Field mustard	extracellular	38.54	36.27
Bra027114.1-P	Field mustard	extracellular	36.46	36.08
Bra018687.1-P	Field mustard	extracellular	36.46	35.35
Bra008112.1-P	Field mustard	extracellular	35.42	34.69
Bra008375.1-P	Field mustard	extracellular	34.38	34.02
Bra033084.1-P	Field mustard	extracellular	28.12	27.0
Bra033087.1-P	Field mustard	extracellular	31.25	14.71

Protein Annotations

Gene3D:1.10.110.10	MapMan:35.2	InterPro:Bifun_inhib/LTP/seed_sf	InterPro:Bifunc_inhib/LTP/seed_store	EnsemblPlantsGene:Bra001701	EnsemblPlants:Bra001701.1
EnsemblPlants:Bra001701.1-P	GO:GO:0006810	GO:GO:0006869	GO:GO:0008150	UniProt:M4CBX1	PFAM:PF14368
PANTHER:PTHR33214	PANTHER:PTHR33214:SF19	SMART:SM00499	SUPFAM:SSF47699	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI0002540472	InterPro:nsLTP2	SEG:seg	:	:	:

Description

AT3G18280 (E=7e-020) | protease inhibitor/seed storage/lipid transfer protein (LTP) family protein

Coordinates

chrA03:+:17936225..17936515

Molecular Weight (calculated)

10241.9 Da

IEP (calculated)

9.855

GRAVY (calculated)

0.375

Length

96 amino acids

Sequence
(BLAST)

1: MLMVKATWVS ILALAAFLLV VLVPAAEAVT CSPMQLSPGA GAIPSSSPPS ALCCAKLKEQ KPCICGYMRN PSLRRYISSP NARKVSNTCK FPMPRC

Best Arabidopsis Sequence Match ( AT3G18280.2 )
(BLAST)

001: MSKTTTHQKH ISINSETNKR SRRNMVMIKT TMVSLFALAA VLLMILAPAA EAVTCSPMQL SPCATAITSS SPPSALCCAK LKEQRPCLCG YMRNPSLRRF
101: VSTPNARKVS KSCKLPIPRC

Arabidopsis Description

Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LP30]
SUBAcon: [extracellular,plasma membrane,endoplasmic reticulum,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.