Factsheet for Bra028162.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 6
vacuole 5
plasma membrane 6
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY01688	Canola	plastid	94.12	72.73
AT5G38195.1	Thale cress	extracellular	61.76	66.32
HORVU0Hr1G001480.2	Barley	cytosol	28.43	60.42
AT5G38180.1	Thale cress	extracellular	55.88	60.0
AT5G38197.1	Thale cress	extracellular	51.96	55.21
Bra030699.1-P	Field mustard	extracellular	45.1	47.42
Bra040627.1-P	Field mustard	extracellular	43.14	46.32
Bra008375.1-P	Field mustard	extracellular	43.14	45.36
Bra032265.1-P	Field mustard	extracellular	43.14	45.36
Bra027114.1-P	Field mustard	extracellular	42.16	44.33
Bra014154.1-P	Field mustard	extracellular	41.18	43.3
Bra022308.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	40.2	42.71
Bra018687.1-P	Field mustard	extracellular	40.2	41.41
HORVU1Hr1G083170.1	Barley	extracellular	38.24	40.62
TraesCS1A01G374200.1	Wheat	extracellular	37.25	39.58
TraesCS1D01G380800.1	Wheat	extracellular	37.25	39.58
TraesCS1B01G394500.1	Wheat	extracellular	37.25	39.58
TraesCS1B01G394100.1	Wheat	extracellular	37.25	39.58
HORVU1Hr1G083160.1	Barley	extracellular	37.25	39.58
TraesCS1B01G394400.1	Wheat	extracellular	36.27	38.54
Bra001701.1-P	Field mustard	extracellular	36.27	38.54
TraesCS1D01G381100.1	Wheat	extracellular	36.27	38.54
GSMUA_Achr2P06400_001	Banana	extracellular	34.31	38.46
Os05t0550300-01	Rice	extracellular	35.29	38.3
Bra021299.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	36.27	38.14
EES18625	Sorghum	extracellular	36.27	38.14
TraesCS1D01G381300.1	Wheat	extracellular	36.27	37.76
TraesCS1A01G374300.1	Wheat	extracellular	35.29	37.5
Os05t0550600-02	Rice	extracellular	35.29	37.5
GSMUA_Achr9P18720_001	Banana	extracellular	33.33	37.36
TraesCS1B01G394700.1	Wheat	extracellular	35.29	37.11
TraesCS1A01G374400.1	Wheat	extracellular	35.29	36.73
TraesCS1D01G381200.1	Wheat	extracellular	35.29	36.73
Zm00001d037677_P001	Maize	endoplasmic reticulum, plasma membrane	36.27	36.63
EES18626	Sorghum	extracellular	37.25	36.54
TraesCS1A01G374500.1	Wheat	extracellular	34.31	36.08
Zm00001d038911_P001	Maize	extracellular	35.29	35.64
TraesCS1D01G381600.1	Wheat	extracellular	33.33	34.69
Bra033084.1-P	Field mustard	extracellular	33.33	34.0
Zm00001d038913_P001	Maize	endoplasmic reticulum, extracellular	32.35	33.67
TraesCS3D01G261600.1	Wheat	extracellular	30.39	32.63
Bra008112.1-P	Field mustard	extracellular	30.39	31.63
TraesCS3A01G261600.1	Wheat	extracellular	29.41	31.58
Bra015966.1-P	Field mustard	extracellular	29.41	30.93
GSMUA_Achr9P21450_001	Banana	endoplasmic reticulum, plasma membrane, plastid	32.35	30.56
HORVU1Hr1G083180.1	Barley	endoplasmic reticulum, extracellular	35.29	29.27
TraesCS3B01G294800.1	Wheat	extracellular	27.45	29.17
HORVU1Hr1G083210.1	Barley	plastid	35.29	29.03
Os01t0691100-01	Rice	endoplasmic reticulum, extracellular, mitochondrion	34.31	28.23
TraesCS1B01G394600.1	Wheat	plastid	30.39	21.53
Bra033087.1-P	Field mustard	extracellular	35.29	17.65

Protein Annotations

EnsemblPlants:Bra028162.1	EnsemblPlants:Bra028162.1-P	EnsemblPlantsGene:Bra028162	Gene3D:1.10.110.10	GO:GO:0006810	GO:GO:0006869
GO:GO:0008150	InterPro:Bifun_inhib/LTP/seed_sf	InterPro:Bifunc_inhib/LTP/seed_store	InterPro:nsLTP2	PANTHER:PTHR33214	PANTHER:PTHR33214:SF7
PFAM:PF14368	SignalP:SignalP-noTM	SMART:SM00499	SUPFAM:SSF47699	UniParc:UPI00025443E0	UniProt:M4EH97
MapMan:35.2	:	:	:	:	:

Description

AT5G38195 (E=6e-034) | protease inhibitor/seed storage/lipid transfer protein (LTP) family protein

Coordinates

chrA04:+:6295241..6295549

Molecular Weight (calculated)

11015.6 Da

IEP (calculated)

6.254

GRAVY (calculated)

0.379

Length

102 amino acids

Sequence
(BLAST)

001: MKFTTLMVIT LVIIAMSSPV PIRATSVESF GEVAQSCVVT ELAPCLPAMT TAGDPTTECC DKLVEQKPCL CGYIRNPAYS MYVTSPNGRK VLDFCKVPFP
101: SC

Best Arabidopsis Sequence Match ( AT5G38195.1 )
(BLAST)

1: MKFMKLMVIT VVIVVMSSPI LIKSEVSSSC IPTELMPCLP AMTTGGQPTK DCCDKLIEQK ECLCGYINNP LYSTFVSSPV ARKVLEVCNI PYPSC

Arabidopsis Description

At5g38195 [Source:UniProtKB/TrEMBL;Acc:Q29QA1]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.