Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 9
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY47738 | Canola | extracellular | 98.98 | 98.98 |
| CDY45874 | Canola | extracellular | 98.98 | 98.98 |
| Bra015966.1-P | Field mustard | extracellular | 75.51 | 76.29 |
| AT1G73780.1 | Thale cress | extracellular | 72.45 | 72.45 |
| Bra022308.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 36.73 | 37.5 |
| Bra040627.1-P | Field mustard | extracellular | 34.69 | 35.79 |
| Bra001701.1-P | Field mustard | extracellular | 34.69 | 35.42 |
| Bra021299.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 34.69 | 35.05 |
| Bra014154.1-P | Field mustard | extracellular | 34.69 | 35.05 |
| Bra027114.1-P | Field mustard | extracellular | 32.65 | 32.99 |
| Bra032265.1-P | Field mustard | extracellular | 32.65 | 32.99 |
| Bra030699.1-P | Field mustard | extracellular | 30.61 | 30.93 |
| Bra028162.1-P | Field mustard | extracellular | 31.63 | 30.39 |
| Bra008375.1-P | Field mustard | extracellular | 27.55 | 27.84 |
| Bra018687.1-P | Field mustard | extracellular | 27.55 | 27.27 |
| Bra033084.1-P | Field mustard | extracellular | 27.55 | 27.0 |
| Bra033087.1-P | Field mustard | extracellular | 24.49 | 11.76 |
Protein Annotations
| EnsemblPlants:Bra008112.1 | EnsemblPlants:Bra008112.1-P | EnsemblPlantsGene:Bra008112 | Gene3D:1.10.110.10 | GO:GO:0006810 | GO:GO:0006869 |
| GO:GO:0008150 | InterPro:Bifun_inhib/LTP/seed_sf | InterPro:Bifunc_inhib/LTP/seed_store | InterPro:nsLTP2 | PANTHER:PTHR33214 | PANTHER:PTHR33214:SF11 |
| PFAM:PF14368 | SignalP:SignalP-noTM | SUPFAM:SSF47699 | UniParc:UPI000254577E | UniProt:M4CV66 | MapMan:35.2 |
Description
AT1G73780 (E=2e-041) | protease inhibitor/seed storage/lipid transfer protein (LTP) family protein
Coordinates
chrA02:+:13194464..13194760
Molecular Weight (calculated)
10893.5 Da
IEP (calculated)
8.358
GRAVY (calculated)
-0.115
Length
98 amino acids
Sequence
(BLAST)
(BLAST)
1: MKFSCSKPVL FTCAILLLLI VAQENRVVAG QSCDPMQLIP CEEAILKGSK PSDTCCTRLN QQQHCVCQYM KNPNFKSFLD SPNAKKIATD CHCPKPKC
1: MKGSCTKPVF FTCTILLILI VAQENRVAAV DPCNPAQLSP CLETIMKGSE PSDLCCSKVK EQQHCICQYL KNPNFKSFLN SPNAKIIATD CHCPYPKC
Arabidopsis Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C9T4]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.