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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • endoplasmic reticulum 5
  • golgi 5
  • extracellular 8
  • vacuole 4
  • plasma membrane 4
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra015966.1-P Field mustard extracellular 72.45 73.2
Bra008112.1-P Field mustard extracellular 72.45 72.45
CDY47738 Canola extracellular 71.43 71.43
CDY45874 Canola extracellular 71.43 71.43
CDY60143 Canola extracellular 70.41 71.13
AT1G43667.1 Thale cress extracellular 36.73 36.73
AT1G48750.1 Thale cress extracellular 34.69 36.17
AT2G14846.1 Thale cress extracellular 34.69 34.34
AT5G38170.1 Thale cress extracellular 35.71 33.98
AT5G38195.1 Thale cress extracellular 31.63 32.63
AT3G18280.2 Thale cress endoplasmic reticulum, extracellular, plasma membrane, plastid 39.8 32.5
AT1G66850.1 Thale cress extracellular 33.67 32.35
AT5G38160.1 Thale cress extracellular 33.67 32.04
AT3G57310.1 Thale cress extracellular 33.67 32.04
AT4G12825.1 Thale cress extracellular 30.61 31.58
AT5G38180.1 Thale cress extracellular 29.59 30.53
AT1G43666.1 Thale cress extracellular 29.59 30.21
AT1G07747.1 Thale cress extracellular 28.57 29.47
AT5G38197.1 Thale cress extracellular 27.55 28.12
AT1G43665.1 Thale cress extracellular 29.59 23.58
Protein Annotations
Gene3D:1.10.110.10EntrezGene:28717421MapMan:35.2UniProt:A0A178WCQ2ProteinID:AAG52085.1ProteinID:AEE35508.1
ArrayExpress:AT1G73780EnsemblPlantsGene:AT1G73780RefSeq:AT1G73780TAIR:AT1G73780RefSeq:AT1G73780-TAIR-GEnsemblPlants:AT1G73780.1
TAIR:AT1G73780.1InterPro:Bifun_inhib/LTP/seed_sfGO:GO:0006810GO:GO:0006869GO:GO:0008150RefSeq:NP_001319377.1
ProteinID:OAP15153.1PO:PO:0009005PANTHER:PTHR33214PANTHER:PTHR33214:SF11UniProt:Q9C9T4SUPFAM:SSF47699
SignalP:SignalP-noTMUniParc:UPI00000A4CC0InterPro:nsLTP2:::
Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C9T4]
Coordinates
chr1:+:27743685..27744453
Molecular Weight (calculated)
10824.3 Da
IEP (calculated)
8.036
GRAVY (calculated)
0.003
Length
98 amino acids
Sequence
(BLAST)
1: MKGSCTKPVF FTCTILLILI VAQENRVAAV DPCNPAQLSP CLETIMKGSE PSDLCCSKVK EQQHCICQYL KNPNFKSFLN SPNAKIIATD CHCPYPKC
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.