Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 8
- vacuole 4
- plasma membrane 4
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra015966.1-P | Field mustard | extracellular | 72.45 | 73.2 |
Bra008112.1-P | Field mustard | extracellular | 72.45 | 72.45 |
CDY47738 | Canola | extracellular | 71.43 | 71.43 |
CDY45874 | Canola | extracellular | 71.43 | 71.43 |
CDY60143 | Canola | extracellular | 70.41 | 71.13 |
AT1G43667.1 | Thale cress | extracellular | 36.73 | 36.73 |
AT1G48750.1 | Thale cress | extracellular | 34.69 | 36.17 |
AT2G14846.1 | Thale cress | extracellular | 34.69 | 34.34 |
AT5G38170.1 | Thale cress | extracellular | 35.71 | 33.98 |
AT5G38195.1 | Thale cress | extracellular | 31.63 | 32.63 |
AT3G18280.2 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane, plastid | 39.8 | 32.5 |
AT1G66850.1 | Thale cress | extracellular | 33.67 | 32.35 |
AT5G38160.1 | Thale cress | extracellular | 33.67 | 32.04 |
AT3G57310.1 | Thale cress | extracellular | 33.67 | 32.04 |
AT4G12825.1 | Thale cress | extracellular | 30.61 | 31.58 |
AT5G38180.1 | Thale cress | extracellular | 29.59 | 30.53 |
AT1G43666.1 | Thale cress | extracellular | 29.59 | 30.21 |
AT1G07747.1 | Thale cress | extracellular | 28.57 | 29.47 |
AT5G38197.1 | Thale cress | extracellular | 27.55 | 28.12 |
AT1G43665.1 | Thale cress | extracellular | 29.59 | 23.58 |
Protein Annotations
Gene3D:1.10.110.10 | EntrezGene:28717421 | MapMan:35.2 | UniProt:A0A178WCQ2 | ProteinID:AAG52085.1 | ProteinID:AEE35508.1 |
ArrayExpress:AT1G73780 | EnsemblPlantsGene:AT1G73780 | RefSeq:AT1G73780 | TAIR:AT1G73780 | RefSeq:AT1G73780-TAIR-G | EnsemblPlants:AT1G73780.1 |
TAIR:AT1G73780.1 | InterPro:Bifun_inhib/LTP/seed_sf | GO:GO:0006810 | GO:GO:0006869 | GO:GO:0008150 | RefSeq:NP_001319377.1 |
ProteinID:OAP15153.1 | PO:PO:0009005 | PANTHER:PTHR33214 | PANTHER:PTHR33214:SF11 | UniProt:Q9C9T4 | SUPFAM:SSF47699 |
SignalP:SignalP-noTM | UniParc:UPI00000A4CC0 | InterPro:nsLTP2 | : | : | : |
Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C9T4]
Coordinates
chr1:+:27743685..27744453
Molecular Weight (calculated)
10824.3 Da
IEP (calculated)
8.036
GRAVY (calculated)
0.003
Length
98 amino acids
Sequence
(BLAST)
(BLAST)
1: MKGSCTKPVF FTCTILLILI VAQENRVAAV DPCNPAQLSP CLETIMKGSE PSDLCCSKVK EQQHCICQYL KNPNFKSFLN SPNAKIIATD CHCPYPKC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.