Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 8
- vacuole 4
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G43667.1 | Thale cress | extracellular | 37.4 | 46.94 |
| AT2G14846.1 | Thale cress | extracellular | 34.15 | 42.42 |
| CDY15628 | Canola | extracellular | 32.52 | 41.24 |
| CDY61300 | Canola | extracellular | 32.52 | 41.24 |
| Bra030699.1-P | Field mustard | extracellular | 32.52 | 41.24 |
| AT1G07747.1 | Thale cress | extracellular | 30.89 | 40.0 |
| CDY61301 | Canola | extracellular | 34.15 | 40.0 |
| AT1G43666.1 | Thale cress | extracellular | 30.89 | 39.58 |
| AT3G57310.1 | Thale cress | extracellular | 32.52 | 38.84 |
| CDY15627 | Canola | extracellular | 32.52 | 38.1 |
| CDY26874 | Canola | extracellular | 28.46 | 36.08 |
| CDY12874 | Canola | extracellular | 28.46 | 36.08 |
| Bra027114.1-P | Field mustard | extracellular | 28.46 | 36.08 |
| Bra008375.1-P | Field mustard | extracellular | 28.46 | 36.08 |
| HORVU0Hr1G001480.2 | Barley | cytosol | 13.82 | 35.42 |
| AT1G48750.1 | Thale cress | extracellular | 26.83 | 35.11 |
| CDY40472 | Canola | extracellular | 27.64 | 35.05 |
| AT5G38160.1 | Thale cress | extracellular | 29.27 | 34.95 |
| AT5G38195.1 | Thale cress | extracellular | 26.83 | 34.74 |
| GSMUA_Achr9P18720_001 | Banana | extracellular | 25.2 | 34.07 |
| GSMUA_Achr2P06400_001 | Banana | extracellular | 25.2 | 34.07 |
| CDX93624 | Canola | extracellular | 26.83 | 33.33 |
| Os05t0550300-01 | Rice | extracellular | 25.2 | 32.98 |
| TraesCS1D01G381200.1 | Wheat | extracellular | 26.02 | 32.65 |
| AT1G66850.1 | Thale cress | extracellular | 26.83 | 32.35 |
| Os05t0550600-02 | Rice | extracellular | 25.2 | 32.29 |
| Zm00001d038913_P001 | Maize | endoplasmic reticulum, extracellular | 25.2 | 31.63 |
| AT5G38180.1 | Thale cress | extracellular | 24.39 | 31.58 |
| AT4G12825.1 | Thale cress | extracellular | 24.39 | 31.58 |
| AT5G38197.1 | Thale cress | extracellular | 24.39 | 31.25 |
| AT5G38170.1 | Thale cress | extracellular | 26.02 | 31.07 |
| Zm00001d037677_P001 | Maize | endoplasmic reticulum, plasma membrane | 25.2 | 30.69 |
| TraesCS1D01G381300.1 | Wheat | extracellular | 24.39 | 30.61 |
| CDX93626 | Canola | extracellular | 24.39 | 30.3 |
| TraesCS1D01G381100.1 | Wheat | extracellular | 23.58 | 30.21 |
| TraesCS1A01G374300.1 | Wheat | extracellular | 23.58 | 30.21 |
| EES18625 | Sorghum | extracellular | 23.58 | 29.9 |
| TraesCS1B01G394700.1 | Wheat | extracellular | 23.58 | 29.9 |
| GSMUA_Achr9P21450_001 | Banana | endoplasmic reticulum, plasma membrane, plastid | 26.02 | 29.63 |
| AT1G73780.1 | Thale cress | extracellular | 23.58 | 29.59 |
| TraesCS1D01G381600.1 | Wheat | extracellular | 23.58 | 29.59 |
| CDX95131 | Canola | extracellular | 23.58 | 29.29 |
| TraesCS1B01G394500.1 | Wheat | extracellular | 22.76 | 29.17 |
| EES18626 | Sorghum | extracellular | 24.39 | 28.85 |
| AT3G18280.2 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane, plastid | 27.64 | 28.33 |
| CDX95132 | Canola | extracellular | 22.76 | 28.28 |
| Bra018687.1-P | Field mustard | extracellular | 22.76 | 28.28 |
| TraesCS1D01G380800.1 | Wheat | extracellular | 21.95 | 28.12 |
| TraesCS1B01G394400.1 | Wheat | extracellular | 21.95 | 28.12 |
| TraesCS1B01G394100.1 | Wheat | extracellular | 21.95 | 28.12 |
| TraesCS1A01G374200.1 | Wheat | extracellular | 21.95 | 28.12 |
| TraesCS1A01G374500.1 | Wheat | extracellular | 21.95 | 27.84 |
| TraesCS3D01G261600.1 | Wheat | extracellular | 21.14 | 27.37 |
| HORVU1Hr1G083170.1 | Barley | extracellular | 21.14 | 27.08 |
| HORVU1Hr1G083160.1 | Barley | extracellular | 21.14 | 27.08 |
| Zm00001d038911_P001 | Maize | extracellular | 21.95 | 26.73 |
| Os01t0691100-01 | Rice | endoplasmic reticulum, extracellular, mitochondrion | 26.83 | 26.61 |
| TraesCS1A01G374400.1 | Wheat | extracellular | 21.14 | 26.53 |
| TraesCS3A01G261600.1 | Wheat | extracellular | 20.33 | 26.32 |
| TraesCS3B01G294800.1 | Wheat | extracellular | 20.33 | 26.04 |
| HORVU1Hr1G083210.1 | Barley | plastid | 24.39 | 24.19 |
| HORVU1Hr1G083180.1 | Barley | endoplasmic reticulum, extracellular | 23.58 | 23.58 |
| TraesCS1B01G394600.1 | Wheat | plastid | 21.95 | 18.75 |
Protein Annotations
| Gene3D:1.10.110.10 | MapMan:35.2 | EntrezGene:840951 | ProteinID:AEE31982.1 | ArrayExpress:AT1G43665 | EnsemblPlantsGene:AT1G43665 |
| RefSeq:AT1G43665 | TAIR:AT1G43665 | RefSeq:AT1G43665-TAIR-G | EnsemblPlants:AT1G43665.1 | TAIR:AT1G43665.1 | Unigene:At.65969 |
| InterPro:Bifun_inhib/LTP/seed_sf | InterPro:Bifunc_inhib/LTP/seed_store | GO:GO:0006810 | GO:GO:0006869 | GO:GO:0008150 | RefSeq:NP_683375.1 |
| PFAM:PF14368 | PANTHER:PTHR33214 | PANTHER:PTHR33214:SF7 | UniProt:Q3ECX8 | SUPFAM:SSF47699 | SignalP:SignalP-noTM |
| TMHMM:TMhelix | UniParc:UPI0000163036 | InterPro:nsLTP2 | : | : | : |
Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q3ECX8]
Coordinates
chr1:-:16452981..16453804
Molecular Weight (calculated)
13564.7 Da
IEP (calculated)
6.649
GRAVY (calculated)
0.200
Length
123 amino acids
Sequence
(BLAST)
(BLAST)
001: MKFITTLMVI AFVLSVLVPT QALRVLSEDK KVACIVTDLQ VCLSALETPI PPSAECCKNL KIQKSCLCDY MENPSIEKYL EPARKVFAAC GMPYPREDAI
101: EVKATHHPVD VVPTHAHTSD VHA
101: EVKATHHPVD VVPTHAHTSD VHA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.