Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 8
- vacuole 4
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G38197.1 | Thale cress | extracellular | 76.84 | 76.04 |
| AT5G38180.1 | Thale cress | extracellular | 71.58 | 71.58 |
| Bra028162.1-P | Field mustard | extracellular | 66.32 | 61.76 |
| CDY01688 | Canola | plastid | 65.26 | 46.97 |
| HORVU0Hr1G001480.2 | Barley | cytosol | 23.16 | 45.83 |
| AT1G66850.1 | Thale cress | extracellular | 48.42 | 45.1 |
| AT5G38160.1 | Thale cress | extracellular | 48.42 | 44.66 |
| AT2G14846.1 | Thale cress | extracellular | 46.32 | 44.44 |
| AT3G57310.1 | Thale cress | extracellular | 45.26 | 41.75 |
| AT1G48750.1 | Thale cress | extracellular | 41.05 | 41.49 |
| AT5G38170.1 | Thale cress | extracellular | 44.21 | 40.78 |
| AT1G07747.1 | Thale cress | extracellular | 37.89 | 37.89 |
| AT1G43666.1 | Thale cress | extracellular | 37.89 | 37.5 |
| AT1G43667.1 | Thale cress | extracellular | 36.84 | 35.71 |
| GSMUA_Achr2P06400_001 | Banana | extracellular | 33.68 | 35.16 |
| AT4G12825.1 | Thale cress | extracellular | 34.74 | 34.74 |
| GSMUA_Achr9P18720_001 | Banana | extracellular | 32.63 | 34.07 |
| TraesCS1B01G394400.1 | Wheat | extracellular | 32.63 | 32.29 |
| TraesCS1D01G380800.1 | Wheat | extracellular | 32.63 | 32.29 |
| TraesCS1B01G394100.1 | Wheat | extracellular | 32.63 | 32.29 |
| TraesCS1A01G374200.1 | Wheat | extracellular | 32.63 | 32.29 |
| Os05t0550600-02 | Rice | extracellular | 32.63 | 32.29 |
| HORVU1Hr1G083160.1 | Barley | extracellular | 32.63 | 32.29 |
| HORVU1Hr1G083170.1 | Barley | extracellular | 32.63 | 32.29 |
| TraesCS1B01G394700.1 | Wheat | extracellular | 32.63 | 31.96 |
| TraesCS1A01G374500.1 | Wheat | extracellular | 32.63 | 31.96 |
| AT1G73780.1 | Thale cress | extracellular | 32.63 | 31.63 |
| TraesCS1A01G374400.1 | Wheat | extracellular | 32.63 | 31.63 |
| TraesCS1D01G381100.1 | Wheat | extracellular | 31.58 | 31.25 |
| TraesCS1B01G394500.1 | Wheat | extracellular | 31.58 | 31.25 |
| Os05t0550300-01 | Rice | extracellular | 30.53 | 30.85 |
| AT3G18280.2 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane, plastid | 38.95 | 30.83 |
| TraesCS1D01G381200.1 | Wheat | extracellular | 31.58 | 30.61 |
| TraesCS1D01G381300.1 | Wheat | extracellular | 31.58 | 30.61 |
| TraesCS3D01G261600.1 | Wheat | extracellular | 30.53 | 30.53 |
| TraesCS1A01G374300.1 | Wheat | extracellular | 30.53 | 30.21 |
| EES18625 | Sorghum | extracellular | 30.53 | 29.9 |
| EES18626 | Sorghum | extracellular | 32.63 | 29.81 |
| Zm00001d037677_P001 | Maize | endoplasmic reticulum, plasma membrane | 31.58 | 29.7 |
| GSMUA_Achr9P21450_001 | Banana | endoplasmic reticulum, plasma membrane, plastid | 33.68 | 29.63 |
| TraesCS1D01G381600.1 | Wheat | extracellular | 30.53 | 29.59 |
| TraesCS3A01G261600.1 | Wheat | extracellular | 29.47 | 29.47 |
| Zm00001d038911_P001 | Maize | extracellular | 30.53 | 28.71 |
| TraesCS3B01G294800.1 | Wheat | extracellular | 28.42 | 28.12 |
| Zm00001d038913_P001 | Maize | endoplasmic reticulum, extracellular | 28.42 | 27.55 |
| AT1G43665.1 | Thale cress | extracellular | 34.74 | 26.83 |
| Os01t0691100-01 | Rice | endoplasmic reticulum, extracellular, mitochondrion | 33.68 | 25.81 |
| HORVU1Hr1G083180.1 | Barley | endoplasmic reticulum, extracellular | 31.58 | 24.39 |
| HORVU1Hr1G083210.1 | Barley | plastid | 31.58 | 24.19 |
| TraesCS1B01G394600.1 | Wheat | plastid | 28.42 | 18.75 |
Protein Annotations
| Gene3D:1.10.110.10 | MapMan:35.2 | EntrezGene:833801 | ProteinID:AED94278.1 | ArrayExpress:AT5G38195 | EnsemblPlantsGene:AT5G38195 |
| RefSeq:AT5G38195 | TAIR:AT5G38195 | RefSeq:AT5G38195-TAIR-G | EnsemblPlants:AT5G38195.1 | TAIR:AT5G38195.1 | Unigene:At.30427 |
| EMBL:BT024655 | InterPro:Bifun_inhib/LTP/seed_sf | InterPro:Bifunc_inhib/LTP/seed_store | EMBL:DQ447010 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0006508 | GO:GO:0006810 | GO:GO:0006869 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 |
| GO:GO:0016787 | GO:GO:0019538 | RefSeq:NP_568555.1 | PFAM:PF14368 | PO:PO:0020127 | PANTHER:PTHR33214 |
| PANTHER:PTHR33214:SF7 | UniProt:Q29QA1 | SMART:SM00499 | SUPFAM:SSF47699 | SignalP:SignalP-noTM | UniParc:UPI000016278C |
| InterPro:nsLTP2 | SEG:seg | : | : | : | : |
Description
At5g38195 [Source:UniProtKB/TrEMBL;Acc:Q29QA1]
Coordinates
chr5:+:15246910..15247329
Molecular Weight (calculated)
10409.1 Da
IEP (calculated)
7.601
GRAVY (calculated)
0.458
Length
95 amino acids
Sequence
(BLAST)
(BLAST)
1: MKFMKLMVIT VVIVVMSSPI LIKSEVSSSC IPTELMPCLP AMTTGGQPTK DCCDKLIEQK ECLCGYINNP LYSTFVSSPV ARKVLEVCNI PYPSC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.