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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 4
  • plasma membrane 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:plasma membrane, plastid
BaCelLo:plastid
ChloroP:plastid
MultiLoc:plasma membrane
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra028162.1-P Field mustard extracellular 72.73 94.12
AT5G38195.1 Thale cress extracellular 46.97 65.26
AT5G38180.1 Thale cress extracellular 43.94 61.05
HORVU0Hr1G001480.2 Barley cytosol 21.21 58.33
AT5G38197.1 Thale cress extracellular 40.15 55.21
CDY50600 Canola extracellular 37.12 50.0
CDY15628 Canola extracellular 35.61 48.45
CDY61300 Canola extracellular 35.61 48.45
CDY12591 Canola extracellular 35.61 47.96
CDY52889 Canola extracellular 34.09 46.88
CDY61301 Canola extracellular 37.12 46.67
CDX93626 Canola extracellular 34.85 46.46
CDX95131 Canola extracellular 34.85 46.46
CDX93624 Canola extracellular 34.85 46.46
CDY26874 Canola extracellular 34.09 46.39
CDY40833 Canola extracellular 33.33 45.36
CDY32103 Canola extracellular 33.33 45.36
CDY68337 Canola extracellular 33.33 45.36
CDY04317 Canola extracellular 33.33 45.36
CDY15627 Canola extracellular 35.61 44.76
CDY12874 Canola extracellular 32.58 44.33
CDY40472 Canola extracellular 31.82 43.3
CDY24453 Canola extracellular 31.06 42.71
CDX92224 Canola extracellular 31.06 42.71
CDX77289 Canola extracellular 31.06 42.27
CDX75963 Canola extracellular 30.3 41.67
CDY48021 Canola endoplasmic reticulum, extracellular, plasma membrane 30.3 41.67
CDY51937 Canola extracellular 30.3 41.67
CDX95546 Canola endoplasmic reticulum, extracellular, plasma membrane 30.3 41.67
CDY16462 Canola extracellular 30.3 41.24
CDX95132 Canola extracellular 30.3 40.4
HORVU1Hr1G083170.1 Barley extracellular 28.79 39.58
TraesCS1D01G380800.1 Wheat extracellular 28.03 38.54
TraesCS1B01G394500.1 Wheat extracellular 28.03 38.54
TraesCS1B01G394100.1 Wheat extracellular 28.03 38.54
HORVU1Hr1G083160.1 Barley extracellular 28.03 38.54
TraesCS1A01G374200.1 Wheat extracellular 28.03 38.54
TraesCS1D01G381100.1 Wheat extracellular 27.27 37.5
TraesCS1B01G394400.1 Wheat extracellular 27.27 37.5
Os05t0550600-02 Rice extracellular 27.27 37.5
Os05t0550300-01 Rice extracellular 26.52 37.23
EES18625 Sorghum extracellular 27.27 37.11
TraesCS1D01G381300.1 Wheat extracellular 27.27 36.73
CDY04056 Canola extracellular 28.03 36.63
EES18626 Sorghum extracellular 28.79 36.54
TraesCS1A01G374300.1 Wheat extracellular 26.52 36.46
GSMUA_Achr2P06400_001 Banana extracellular 25.0 36.26
TraesCS1B01G394700.1 Wheat extracellular 26.52 36.08
TraesCS1D01G381200.1 Wheat extracellular 26.52 35.71
TraesCS1A01G374400.1 Wheat extracellular 26.52 35.71
Zm00001d037677_P001 Maize endoplasmic reticulum, plasma membrane 27.27 35.64
TraesCS1A01G374500.1 Wheat extracellular 25.76 35.05
Zm00001d038911_P001 Maize extracellular 26.52 34.65
GSMUA_Achr9P18720_001 Banana extracellular 23.48 34.07
Zm00001d038913_P001 Maize endoplasmic reticulum, extracellular 25.0 33.67
TraesCS1D01G381600.1 Wheat extracellular 25.0 33.67
TraesCS3D01G261600.1 Wheat extracellular 23.48 32.63
CDY70822 Canola extracellular 25.0 32.35
HORVU1Hr1G083210.1 Barley plastid 30.3 32.26
CDY45874 Canola extracellular 23.48 31.63
CDY47738 Canola extracellular 23.48 31.63
TraesCS3A01G261600.1 Wheat extracellular 22.73 31.58
CDY60143 Canola extracellular 22.73 30.93
GSMUA_Achr9P21450_001 Banana endoplasmic reticulum, plasma membrane, plastid 25.0 30.56
HORVU1Hr1G083180.1 Barley endoplasmic reticulum, extracellular 28.03 30.08
TraesCS3B01G294800.1 Wheat extracellular 21.21 29.17
Os01t0691100-01 Rice endoplasmic reticulum, extracellular, mitochondrion 25.76 27.42
TraesCS1B01G394600.1 Wheat plastid 24.24 22.22
CDY44406 Canola extracellular 25.76 18.38
Protein Annotations
EnsemblPlants:CDY01688EnsemblPlantsGene:GSBRNA2T00112768001Gene3D:1.10.110.10GO:GO:0006810GO:GO:0006869GO:GO:0008150
InterPro:Bifun_inhib/LTP/seed_sfInterPro:Bifunc_inhib/LTP/seed_storeInterPro:nsLTP2PANTHER:PTHR33214PANTHER:PTHR33214:SF7PFAM:PF14368
ProteinID:CDY01688ProteinID:CDY01688.1SMART:SM00499SUPFAM:SSF47699TMHMM:TMhelixunigene:Bna.1377
UniParc:UPI0004EE2062MapMan:35.2::::
Description
BnaC04g30640D
Coordinates
chrLK031928:-:439551..439949
Molecular Weight (calculated)
14584.0 Da
IEP (calculated)
8.766
GRAVY (calculated)
0.050
Length
132 amino acids
Sequence
(BLAST)
001: MNTSNPNLTN TSIKRPKNFK AKKIPLGFHD MKFTTLMLIT FVIIAMSSPV PIRATRVESF GEVAQSCVVT ELAPCLPAMT LTGDPTTECC DKLVEQKPCL
101: CGYIRNPAYS MYVTSPNARK VLDFCKVPFP SC
Best Arabidopsis Sequence Match ( AT5G38195.1 )
(BLAST)
1: MKFMKLMVIT VVIVVMSSPI LIKSEVSSSC IPTELMPCLP AMTTGGQPTK DCCDKLIEQK ECLCGYINNP LYSTFVSSPV ARKVLEVCNI PYPSC
Arabidopsis Description
At5g38195 [Source:UniProtKB/TrEMBL;Acc:Q29QA1]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.