Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 6
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY51937 | Canola | extracellular | 97.92 | 97.92 |
| Bra001701.1-P | Field mustard | extracellular | 94.79 | 94.79 |
| CDX92224 | Canola | extracellular | 85.42 | 85.42 |
| CDY24453 | Canola | extracellular | 84.38 | 84.38 |
| CDY48021 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 82.29 | 82.29 |
| CDX95546 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 82.29 | 82.29 |
| CDY04317 | Canola | extracellular | 69.79 | 69.07 |
| CDY40833 | Canola | extracellular | 67.71 | 67.01 |
| CDY32103 | Canola | extracellular | 67.71 | 67.01 |
| CDY68337 | Canola | extracellular | 66.67 | 65.98 |
| CDX77289 | Canola | extracellular | 59.38 | 58.76 |
| CDY16462 | Canola | extracellular | 59.38 | 58.76 |
| VIT_14s0006g02530.t01 | Wine grape | plastid | 45.83 | 54.32 |
| KRH01717 | Soybean | extracellular | 50.0 | 50.53 |
| PGSC0003DMT400056028 | Potato | extracellular | 47.92 | 50.0 |
| KRH70406 | Soybean | extracellular | 48.96 | 49.47 |
| Solyc02g086310.1.1 | Tomato | extracellular | 47.92 | 48.94 |
| PGSC0003DMT400067824 | Potato | extracellular | 47.92 | 48.94 |
| VIT_14s0006g02550.t01 | Wine grape | extracellular | 42.71 | 44.57 |
| CDY50600 | Canola | extracellular | 44.79 | 43.88 |
| CDY12591 | Canola | extracellular | 44.79 | 43.88 |
| CDY52889 | Canola | extracellular | 42.71 | 42.71 |
| CDY61300 | Canola | extracellular | 39.58 | 39.18 |
| CDY15628 | Canola | extracellular | 39.58 | 39.18 |
| CDY60143 | Canola | extracellular | 38.54 | 38.14 |
| CDY61301 | Canola | extracellular | 40.62 | 37.14 |
| CDY40472 | Canola | extracellular | 37.5 | 37.11 |
| CDY12874 | Canola | extracellular | 37.5 | 37.11 |
| CDX95132 | Canola | extracellular | 37.5 | 36.36 |
| CDY15627 | Canola | extracellular | 39.58 | 36.19 |
| CDY47738 | Canola | extracellular | 36.46 | 35.71 |
| CDY45874 | Canola | extracellular | 36.46 | 35.71 |
| CDX93624 | Canola | extracellular | 36.46 | 35.35 |
| CDY26874 | Canola | extracellular | 35.42 | 35.05 |
| CDX93626 | Canola | extracellular | 34.38 | 33.33 |
| CDX95131 | Canola | extracellular | 33.33 | 32.32 |
| CDY01688 | Canola | plastid | 41.67 | 30.3 |
| CDY04056 | Canola | extracellular | 31.25 | 29.7 |
| CDY70822 | Canola | extracellular | 27.08 | 25.49 |
| CDY44406 | Canola | extracellular | 32.29 | 16.76 |
Protein Annotations
| EnsemblPlants:CDX75963 | EnsemblPlantsGene:GSBRNA2T00123995001 | Gene3D:1.10.110.10 | GO:GO:0006810 | GO:GO:0006869 | GO:GO:0008150 |
| InterPro:Bifun_inhib/LTP/seed_sf | InterPro:Bifunc_inhib/LTP/seed_store | InterPro:nsLTP2 | PANTHER:PTHR33214 | PANTHER:PTHR33214:SF19 | PFAM:PF14368 |
| ProteinID:CDX75963 | ProteinID:CDX75963.1 | SEG:seg | SignalP:SignalP-noTM | SMART:SM00499 | SUPFAM:SSF47699 |
| TMHMM:TMhelix | UniParc:UPI0004EC7594 | MapMan:35.2 | : | : | : |
Description
BnaC03g40460D
Coordinates
chrLK031805:+:2201701..2202181
Molecular Weight (calculated)
10292.0 Da
IEP (calculated)
9.547
GRAVY (calculated)
0.434
Length
96 amino acids
Sequence
(BLAST)
(BLAST)
1: MVMVKATWVS LLALAAFLLV VLVPAAEAVT CSPMQLSPCA AAITSSSPPS ALCCAKLKEQ KPCICGYMRN PSLRRYISSP NARKVSNTCK FPMPRC
1: MVMIKTTMVS LFALAAVLLM ILAPAAEAVT CSPMQLSPCA TAITSSSPPS ALCCAKLKEQ RPCLCGYMRN PSLRRFVSTP NARKVSKSCK LPIPRC
Arabidopsis Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LP30]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.