CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra022308.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	97.92	97.92
CDY24453	Canola	extracellular	96.88	96.88
CDY48021	Canola	endoplasmic reticulum, extracellular, plasma membrane	89.58	89.58
CDX95546	Canola	endoplasmic reticulum, extracellular, plasma membrane	89.58	89.58
CDX75963	Canola	extracellular	85.42	85.42
CDY51937	Canola	extracellular	83.33	83.33
AT3G18280.2	Thale cress	endoplasmic reticulum, extracellular, plasma membrane, plastid	89.58	71.67
CDY04317	Canola	extracellular	64.58	63.92
CDY32103	Canola	extracellular	62.5	61.86
CDY40833	Canola	extracellular	62.5	61.86
CDY68337	Canola	extracellular	61.46	60.82
CDY16462	Canola	extracellular	55.21	54.64
CDX77289	Canola	extracellular	55.21	54.64
VIT_14s0006g02530.t01	Wine grape	plastid	43.75	51.85
KRH70406	Soybean	extracellular	51.04	51.58
PGSC0003DMT400067824	Potato	extracellular	50.0	51.06
Solyc02g086310.1.1	Tomato	extracellular	50.0	51.06
KRH01717	Soybean	extracellular	50.0	50.53
PGSC0003DMT400056028	Potato	extracellular	46.88	48.91
VIT_14s0006g02550.t01	Wine grape	extracellular	39.58	41.3
CDY12591	Canola	extracellular	41.67	40.82
CDY50600	Canola	extracellular	41.67	40.82
CDY52889	Canola	extracellular	39.58	39.58
CDY61300	Canola	extracellular	39.58	39.18
CDY12874	Canola	extracellular	38.54	38.14
CDY15628	Canola	extracellular	38.54	38.14
CDY60143	Canola	extracellular	38.54	38.14
CDY45874	Canola	extracellular	38.54	37.76
CDY47738	Canola	extracellular	38.54	37.76
CDX93624	Canola	extracellular	38.54	37.37
CDY40472	Canola	extracellular	37.5	37.11
CDY61301	Canola	extracellular	39.58	36.19
CDX95132	Canola	extracellular	36.46	35.35
CDY15627	Canola	extracellular	38.54	35.24
CDY26874	Canola	extracellular	34.38	34.02
CDX93626	Canola	extracellular	34.38	33.33
CDX95131	Canola	extracellular	33.33	32.32
CDY01688	Canola	plastid	42.71	31.06
CDY04056	Canola	extracellular	31.25	29.7
CDY70822	Canola	extracellular	25.0	23.53
CDY44406	Canola	extracellular	30.21	15.68

Protein Annotations

EnsemblPlants:CDX92224	EnsemblPlantsGene:GSBRNA2T00153936001	Gene3D:1.10.110.10	GO:GO:0006810	GO:GO:0006869	GO:GO:0008150
InterPro:Bifun_inhib/LTP/seed_sf	InterPro:Bifunc_inhib/LTP/seed_store	InterPro:nsLTP2	PANTHER:PTHR33214	PANTHER:PTHR33214:SF19	PFAM:PF14368
ProteinID:CDX92224	ProteinID:CDX92224.1	SEG:seg	SignalP:SignalP-noTM	SMART:SM00499	SUPFAM:SSF47699
TMHMM:TMhelix	UniParc:UPI0004EEC8A3	MapMan:35.2	:	:	:

Description

BnaA05g21830D

Coordinates

chrLK031871:+:901151..901441

Molecular Weight (calculated)

10294.0 Da

IEP (calculated)

10.000

GRAVY (calculated)

0.401

Length

96 amino acids

Sequence
(BLAST)

1: MVMIKASWVS LFAIAAVLLV ILAPAAEAVT CSPMQLSPCA QAITSSSPPS ALCCAKLKEQ KPCLCGYMRN PSLRRFVSSP NARKVSNRCK LPIPRC

Best Arabidopsis Sequence Match ( AT3G18280.2 )
(BLAST)

001: MSKTTTHQKH ISINSETNKR SRRNMVMIKT TMVSLFALAA VLLMILAPAA EAVTCSPMQL SPCATAITSS SPPSALCCAK LKEQRPCLCG YMRNPSLRRF
101: VSTPNARKVS KSCKLPIPRC

Arabidopsis Description

Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LP30]
SUBAcon: [endoplasmic reticulum,plastid,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.