CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 5
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48021	Canola	endoplasmic reticulum, extracellular, plasma membrane	100.0	100.0
Bra021299.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	93.75	92.78
CDY24453	Canola	extracellular	90.62	90.62
CDX92224	Canola	extracellular	89.58	89.58
CDY51937	Canola	extracellular	83.33	83.33
CDX75963	Canola	extracellular	82.29	82.29
AT3G18280.2	Thale cress	endoplasmic reticulum, extracellular, plasma membrane, plastid	84.38	67.5
CDY40833	Canola	extracellular	63.54	62.89
CDY32103	Canola	extracellular	63.54	62.89
CDY04317	Canola	extracellular	63.54	62.89
CDY68337	Canola	extracellular	62.5	61.86
CDY16462	Canola	extracellular	55.21	54.64
CDX77289	Canola	extracellular	54.17	53.61
KRH70406	Soybean	extracellular	50.0	50.53
KRH01717	Soybean	extracellular	48.96	49.47
VIT_14s0006g02530.t01	Wine grape	plastid	41.67	49.38
PGSC0003DMT400067824	Potato	extracellular	46.88	47.87
Solyc02g086310.1.1	Tomato	extracellular	46.88	47.87
PGSC0003DMT400056028	Potato	extracellular	44.79	46.74
CDY12591	Canola	extracellular	41.67	40.82
CDY50600	Canola	extracellular	41.67	40.82
CDY61300	Canola	extracellular	40.62	40.21
CDY52889	Canola	extracellular	39.58	39.58
CDY15628	Canola	extracellular	39.58	39.18
CDY12874	Canola	extracellular	39.58	39.18
VIT_14s0006g02550.t01	Wine grape	extracellular	37.5	39.13
CDY40472	Canola	extracellular	38.54	38.14
CDY61301	Canola	extracellular	40.62	37.14
CDY60143	Canola	extracellular	37.5	37.11
CDY47738	Canola	extracellular	37.5	36.73
CDY45874	Canola	extracellular	37.5	36.73
CDY15627	Canola	extracellular	39.58	36.19
CDX95132	Canola	extracellular	36.46	35.35
CDX93624	Canola	extracellular	36.46	35.35
CDY26874	Canola	extracellular	35.42	35.05
CDX93626	Canola	extracellular	33.33	32.32
CDX95131	Canola	extracellular	32.29	31.31
CDY01688	Canola	plastid	41.67	30.3
CDY04056	Canola	extracellular	30.21	28.71
CDY70822	Canola	extracellular	23.96	22.55
CDY44406	Canola	extracellular	31.25	16.22

Protein Annotations

EnsemblPlants:CDX95546	EnsemblPlantsGene:GSBRNA2T00101390001	Gene3D:1.10.110.10	GO:GO:0006810	GO:GO:0006869	GO:GO:0008150
InterPro:Bifun_inhib/LTP/seed_sf	InterPro:Bifunc_inhib/LTP/seed_store	InterPro:nsLTP2	PANTHER:PTHR33214	PANTHER:PTHR33214:SF19	PFAM:PF14368
ProteinID:CDX95546	ProteinID:CDX95546.1	ProteinID:CDY48021.1	SEG:seg	SignalP:SignalP-noTM	SMART:SM00499
SUPFAM:SSF47699	TMHMM:TMhelix	UniParc:UPI0004EE8DA3	UniProt:A0A078E2M9	MapMan:35.2	:

Description

BnaC01g34380DBnaA04g26690D protein [Source:UniProtKB/TrEMBL;Acc:A0A078E2M9]

Coordinates

chrLK031889:+:1191091..1191434

Molecular Weight (calculated)

10489.2 Da

IEP (calculated)

9.999

GRAVY (calculated)

0.282

Length

96 amino acids

Sequence
(BLAST)

1: MEMIKPTWVS IFAFAAILLV ILVPAAEAVT CSPMQLSPCA SAITSSSQPS ALCCAKLKEQ KPCLCGYMRN RSLRRFVSSP NARKVSNRCK LPIPRC

Best Arabidopsis Sequence Match ( AT3G18280.2 )
(BLAST)

001: MSKTTTHQKH ISINSETNKR SRRNMVMIKT TMVSLFALAA VLLMILAPAA EAVTCSPMQL SPCATAITSS SPPSALCCAK LKEQRPCLCG YMRNPSLRRF
101: VSTPNARKVS KSCKLPIPRC

Arabidopsis Description

Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LP30]
SUBAcon: [endoplasmic reticulum,plastid,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.