Factsheet for Bra021299.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 6
plasma membrane 7
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48021	Canola	endoplasmic reticulum, extracellular, plasma membrane	92.78	93.75
CDX95546	Canola	endoplasmic reticulum, extracellular, plasma membrane	92.78	93.75
Bra022308.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	87.63	88.54
Bra001701.1-P	Field mustard	extracellular	79.38	80.21
AT3G18280.2	Thale cress	endoplasmic reticulum, extracellular, plasma membrane, plastid	80.41	65.0
Bra032265.1-P	Field mustard	extracellular	60.82	60.82
Bra014154.1-P	Field mustard	extracellular	54.64	54.64
KRH70406	Soybean	extracellular	49.48	50.53
KRH01717	Soybean	extracellular	48.45	49.47
VIT_14s0006g02530.t01	Wine grape	plastid	40.21	48.15
Solyc02g086310.1.1	Tomato	extracellular	44.33	45.74
PGSC0003DMT400067824	Potato	extracellular	44.33	45.74
PGSC0003DMT400056028	Potato	extracellular	43.3	45.65
Bra040627.1-P	Field mustard	extracellular	41.24	42.11
VIT_14s0006g02550.t01	Wine grape	extracellular	37.11	39.13
Bra030699.1-P	Field mustard	extracellular	37.11	37.11
Bra027114.1-P	Field mustard	extracellular	37.11	37.11
Bra028162.1-P	Field mustard	extracellular	38.14	36.27
Bra015966.1-P	Field mustard	extracellular	36.08	36.08
Bra008112.1-P	Field mustard	extracellular	35.05	34.69
Bra008375.1-P	Field mustard	extracellular	32.99	32.99
Bra018687.1-P	Field mustard	extracellular	32.99	32.32
Bra033084.1-P	Field mustard	extracellular	25.77	25.0
Bra033087.1-P	Field mustard	extracellular	30.93	14.71

Protein Annotations

EnsemblPlants:Bra021299.1	EnsemblPlants:Bra021299.1-P	EnsemblPlantsGene:Bra021299	Gene3D:1.10.110.10	GO:GO:0006810	GO:GO:0006869
GO:GO:0008150	InterPro:Bifun_inhib/LTP/seed_sf	InterPro:Bifunc_inhib/LTP/seed_store	InterPro:nsLTP2	PANTHER:PTHR33214	PANTHER:PTHR33214:SF19
PFAM:PF14368	SEG:seg	SignalP:SignalP-noTM	SMART:SM00499	SUPFAM:SSF47699	TMHMM:TMhelix
UniParc:UPI000254521A	UniProt:M4DXQ3	MapMan:35.2	:	:	:

Description

AT3G18280 (E=2e-034) | protease inhibitor/seed storage/lipid transfer protein (LTP) family protein

Coordinates

chrA01:+:22698380..22698673

Molecular Weight (calculated)

10545.3 Da

IEP (calculated)

10.249

GRAVY (calculated)

0.348

Length

97 amino acids

Sequence
(BLAST)

1: MEMIKAKWVS IVALAAIFLV VILVPAAEAV TCSPMQLSPC ASAITSSSQT SALCCAKLKE QKPCLCGYMR NRSLRRFVSS PNARKVSNRC KLPIPRC

Best Arabidopsis Sequence Match ( AT3G18280.2 )
(BLAST)

001: MSKTTTHQKH ISINSETNKR SRRNMVMIKT TMVSLFALAA VLLMILAPAA EAVTCSPMQL SPCATAITSS SPPSALCCAK LKEQRPCLCG YMRNPSLRRF
101: VSTPNARKVS KSCKLPIPRC

Arabidopsis Description

Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LP30]
SUBAcon: [endoplasmic reticulum,plastid,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.