Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY40833 | Canola | extracellular | 100.0 | 100.0 |
| CDY68337 | Canola | extracellular | 97.94 | 97.94 |
| CDY04317 | Canola | extracellular | 97.94 | 97.94 |
| AT1G48750.1 | Thale cress | extracellular | 73.2 | 75.53 |
| CDX77289 | Canola | extracellular | 75.26 | 75.26 |
| CDY16462 | Canola | extracellular | 74.23 | 74.23 |
| CDX75963 | Canola | extracellular | 67.01 | 67.71 |
| CDY51937 | Canola | extracellular | 67.01 | 67.71 |
| CDX95546 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 62.89 | 63.54 |
| CDY48021 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 62.89 | 63.54 |
| CDY24453 | Canola | extracellular | 62.89 | 63.54 |
| CDX92224 | Canola | extracellular | 61.86 | 62.5 |
| PGSC0003DMT400056028 | Potato | extracellular | 54.64 | 57.61 |
| KRH01717 | Soybean | extracellular | 52.58 | 53.68 |
| VIT_14s0006g02530.t01 | Wine grape | plastid | 44.33 | 53.09 |
| KRH70406 | Soybean | extracellular | 49.48 | 50.53 |
| Solyc02g086310.1.1 | Tomato | extracellular | 44.33 | 45.74 |
| VIT_14s0006g02550.t01 | Wine grape | extracellular | 43.3 | 45.65 |
| PGSC0003DMT400067824 | Potato | extracellular | 43.3 | 44.68 |
| CDY15628 | Canola | extracellular | 42.27 | 42.27 |
| CDY61300 | Canola | extracellular | 42.27 | 42.27 |
| CDY52889 | Canola | extracellular | 40.21 | 40.62 |
| CDY26874 | Canola | extracellular | 40.21 | 40.21 |
| CDY12874 | Canola | extracellular | 40.21 | 40.21 |
| CDY15627 | Canola | extracellular | 43.3 | 40.0 |
| CDY61301 | Canola | extracellular | 43.3 | 40.0 |
| CDY40472 | Canola | extracellular | 39.18 | 39.18 |
| CDY50600 | Canola | extracellular | 38.14 | 37.76 |
| CDY12591 | Canola | extracellular | 38.14 | 37.76 |
| CDX93624 | Canola | extracellular | 37.11 | 36.36 |
| CDY60143 | Canola | extracellular | 34.02 | 34.02 |
| CDX95132 | Canola | extracellular | 34.02 | 33.33 |
| CDY01688 | Canola | plastid | 45.36 | 33.33 |
| CDY47738 | Canola | extracellular | 32.99 | 32.65 |
| CDY45874 | Canola | extracellular | 32.99 | 32.65 |
| CDX95131 | Canola | extracellular | 32.99 | 32.32 |
| CDX93626 | Canola | extracellular | 32.99 | 32.32 |
| CDY04056 | Canola | extracellular | 27.84 | 26.73 |
| CDY70822 | Canola | extracellular | 23.71 | 22.55 |
| CDY44406 | Canola | extracellular | 28.87 | 15.14 |
Protein Annotations
| EnsemblPlants:CDY32103 | EnsemblPlantsGene:GSBRNA2T00051458001 | Gene3D:1.10.110.10 | GO:GO:0006810 | GO:GO:0006869 | GO:GO:0008150 |
| InterPro:Bifun_inhib/LTP/seed_sf | InterPro:Bifunc_inhib/LTP/seed_store | InterPro:nsLTP2 | PANTHER:PTHR33214 | PANTHER:PTHR33214:SF19 | PFAM:PF14368 |
| ProteinID:CDY32103 | ProteinID:CDY32103.1 | ProteinID:CDY40833.1 | SEG:seg | SignalP:SignalP-noTM | SMART:SM00499 |
| SUPFAM:SSF47699 | TMHMM:TMhelix | UniParc:UPI0004EEE166 | UniProt:A0A078HVM0 | MapMan:35.2 | : |
Description
BnaC04g44630DBnaC01g31230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HVM0]
Coordinates
chrLK032287:+:304576..305051
Molecular Weight (calculated)
10409.0 Da
IEP (calculated)
8.780
GRAVY (calculated)
0.427
Length
97 amino acids
Sequence
(BLAST)
(BLAST)
1: MVKVMWVFVL ALVAALLLVT VEKIPVAEGV TCSVTELSPC LAAFMSSSQP SASCCAKLRE QKPCLCGYMR NPSLRQYVTS PNAKKVSNSC KVASPHC
001: MKIVTLVLVV FVILSTSFPA AIKAEDTGDT GNVGVTCDAR QLQPCLAAIT GGGQPSGACC AKLTEQQSCL CGFAKNPAFA QYISSPNARK VLLACNVAYP
101: TC
101: TC
Arabidopsis Description
At1g66850 [Source:UniProtKB/TrEMBL;Acc:Q9C9N7]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.