Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 8
- plastid 1
- vacuole 4
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY04317 | Canola | extracellular | 77.66 | 75.26 |
| CDY68337 | Canola | extracellular | 75.53 | 73.2 |
| CDY40833 | Canola | extracellular | 75.53 | 73.2 |
| CDY32103 | Canola | extracellular | 75.53 | 73.2 |
| Bra032265.1-P | Field mustard | extracellular | 75.53 | 73.2 |
| CDX77289 | Canola | extracellular | 70.21 | 68.04 |
| Bra014154.1-P | Field mustard | extracellular | 70.21 | 68.04 |
| CDY16462 | Canola | extracellular | 69.15 | 67.01 |
| VIT_14s0006g02530.t01 | Wine grape | plastid | 46.81 | 54.32 |
| AT3G18280.2 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane, plastid | 67.02 | 52.5 |
| PGSC0003DMT400056028 | Potato | extracellular | 51.06 | 52.17 |
| KRH70406 | Soybean | extracellular | 50.0 | 49.47 |
| KRH01717 | Soybean | extracellular | 50.0 | 49.47 |
| Solyc02g086310.1.1 | Tomato | extracellular | 44.68 | 44.68 |
| PGSC0003DMT400067824 | Potato | extracellular | 44.68 | 44.68 |
| VIT_14s0006g02550.t01 | Wine grape | extracellular | 41.49 | 42.39 |
| AT5G38195.1 | Thale cress | extracellular | 41.49 | 41.05 |
| AT1G66850.1 | Thale cress | extracellular | 42.55 | 39.22 |
| AT2G14846.1 | Thale cress | extracellular | 39.36 | 37.37 |
| AT5G38170.1 | Thale cress | extracellular | 40.43 | 36.89 |
| AT5G38160.1 | Thale cress | extracellular | 39.36 | 35.92 |
| AT1G73780.1 | Thale cress | extracellular | 36.17 | 34.69 |
| AT1G43667.1 | Thale cress | extracellular | 36.17 | 34.69 |
| AT5G38197.1 | Thale cress | extracellular | 34.04 | 33.33 |
| AT1G43666.1 | Thale cress | extracellular | 34.04 | 33.33 |
| AT5G38180.1 | Thale cress | extracellular | 32.98 | 32.63 |
| AT3G57310.1 | Thale cress | extracellular | 32.98 | 30.1 |
| AT4G12825.1 | Thale cress | extracellular | 28.72 | 28.42 |
| AT1G07747.1 | Thale cress | extracellular | 27.66 | 27.37 |
| AT1G43665.1 | Thale cress | extracellular | 35.11 | 26.83 |
Protein Annotations
| Gene3D:1.10.110.10 | MapMan:35.2 | EntrezGene:841297 | UniProt:A0A178WPD2 | ProteinID:AEE32344.1 | ArrayExpress:AT1G48750 |
| EnsemblPlantsGene:AT1G48750 | RefSeq:AT1G48750 | TAIR:AT1G48750 | RefSeq:AT1G48750-TAIR-G | EnsemblPlants:AT1G48750.1 | TAIR:AT1G48750.1 |
| EMBL:AY045879 | EMBL:AY091170 | Unigene:At.75142 | InterPro:Bifun_inhib/LTP/seed_sf | InterPro:Bifunc_inhib/LTP/seed_store | GO:GO:0006810 |
| GO:GO:0006869 | GO:GO:0008150 | RefSeq:NP_564532.1 | ProteinID:OAP19435.1 | PFAM:PF14368 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR33214 |
| PANTHER:PTHR33214:SF19 | UniProt:Q94AQ3 | SMART:SM00499 | SUPFAM:SSF47699 | SignalP:SignalP-noTM | TMHMM:TMhelix |
| UniParc:UPI00000A701B | InterPro:nsLTP2 | SEG:seg | : | : | : |
Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q94AQ3]
Coordinates
chr1:+:18035967..18036510
Molecular Weight (calculated)
9936.3 Da
IEP (calculated)
8.591
GRAVY (calculated)
0.310
Length
94 amino acids
Sequence
(BLAST)
(BLAST)
1: MVKVMWVSVL ALAAAILLLT VPVAEGVTCS PMQLASCAAA MTSSSPPSEA CCTKLREQQP CLCGYMRNPT LRQYVSSPNA RKVSNSCKIP SPSC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.