Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 8
- vacuole 4
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G38160.1 | Thale cress | extracellular | 65.05 | 65.05 |
| HORVU0Hr1G001480.2 | Barley | cytosol | 25.24 | 54.17 |
| AT4G12825.1 | Thale cress | extracellular | 42.72 | 46.32 |
| AT3G57310.1 | Thale cress | extracellular | 45.63 | 45.63 |
| AT1G66850.1 | Thale cress | extracellular | 44.66 | 45.1 |
| AT1G43666.1 | Thale cress | extracellular | 41.75 | 44.79 |
| AT5G38195.1 | Thale cress | extracellular | 40.78 | 44.21 |
| GSMUA_Achr9P18720_001 | Banana | extracellular | 38.84 | 43.96 |
| AT2G14846.1 | Thale cress | extracellular | 41.75 | 43.43 |
| AT1G07747.1 | Thale cress | extracellular | 39.81 | 43.16 |
| GSMUA_Achr2P06400_001 | Banana | extracellular | 37.86 | 42.86 |
| TraesCS1B01G394100.1 | Wheat | extracellular | 39.81 | 42.71 |
| Os05t0550600-02 | Rice | extracellular | 39.81 | 42.71 |
| TraesCS1B01G394500.1 | Wheat | extracellular | 38.84 | 41.67 |
| TraesCS1D01G381100.1 | Wheat | extracellular | 38.84 | 41.67 |
| TraesCS1A01G374200.1 | Wheat | extracellular | 38.84 | 41.67 |
| TraesCS1D01G380800.1 | Wheat | extracellular | 38.84 | 41.67 |
| TraesCS1B01G394400.1 | Wheat | extracellular | 38.84 | 41.67 |
| AT5G38180.1 | Thale cress | extracellular | 37.86 | 41.05 |
| TraesCS1A01G374300.1 | Wheat | extracellular | 37.86 | 40.62 |
| HORVU1Hr1G083160.1 | Barley | extracellular | 37.86 | 40.62 |
| Zm00001d037677_P001 | Maize | endoplasmic reticulum, plasma membrane | 39.81 | 40.59 |
| Os05t0550300-01 | Rice | extracellular | 36.89 | 40.43 |
| AT1G48750.1 | Thale cress | extracellular | 36.89 | 40.43 |
| EES18625 | Sorghum | extracellular | 37.86 | 40.21 |
| HORVU1Hr1G083170.1 | Barley | extracellular | 36.89 | 39.58 |
| AT1G43667.1 | Thale cress | extracellular | 36.89 | 38.78 |
| TraesCS1D01G381200.1 | Wheat | extracellular | 35.92 | 37.76 |
| TraesCS1D01G381300.1 | Wheat | extracellular | 35.92 | 37.76 |
| Zm00001d038911_P001 | Maize | extracellular | 36.89 | 37.62 |
| AT5G38197.1 | Thale cress | extracellular | 34.95 | 37.5 |
| TraesCS1B01G394700.1 | Wheat | extracellular | 34.95 | 37.11 |
| TraesCS1D01G381600.1 | Wheat | extracellular | 34.95 | 36.73 |
| GSMUA_Achr9P21450_001 | Banana | endoplasmic reticulum, plasma membrane, plastid | 37.86 | 36.11 |
| AT1G73780.1 | Thale cress | extracellular | 33.98 | 35.71 |
| TraesCS3D01G261600.1 | Wheat | extracellular | 32.04 | 34.74 |
| TraesCS1A01G374400.1 | Wheat | extracellular | 33.01 | 34.69 |
| TraesCS1A01G374500.1 | Wheat | extracellular | 32.04 | 34.02 |
| TraesCS3A01G261600.1 | Wheat | extracellular | 31.07 | 33.68 |
| EES18626 | Sorghum | extracellular | 33.98 | 33.65 |
| TraesCS3B01G294800.1 | Wheat | extracellular | 31.07 | 33.33 |
| AT3G18280.2 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane, plastid | 34.95 | 30.0 |
| Zm00001d038913_P001 | Maize | endoplasmic reticulum, extracellular | 28.16 | 29.59 |
| HORVU1Hr1G083180.1 | Barley | endoplasmic reticulum, extracellular | 34.95 | 29.27 |
| HORVU1Hr1G083210.1 | Barley | plastid | 34.95 | 29.03 |
| Os01t0691100-01 | Rice | endoplasmic reticulum, extracellular, mitochondrion | 33.98 | 28.23 |
| AT1G43665.1 | Thale cress | extracellular | 31.07 | 26.02 |
| TraesCS1B01G394600.1 | Wheat | plastid | 33.01 | 23.61 |
Protein Annotations
| Gene3D:1.10.110.10 | MapMan:35.2 | EntrezGene:833797 | ProteinID:AED94275.1 | ArrayExpress:AT5G38170 | EnsemblPlantsGene:AT5G38170 |
| RefSeq:AT5G38170 | TAIR:AT5G38170 | RefSeq:AT5G38170-TAIR-G | EnsemblPlants:AT5G38170.1 | TAIR:AT5G38170.1 | Unigene:At.30430 |
| ProteinID:BAB11284.1 | EMBL:BT003991 | EMBL:BT005091 | InterPro:Bifun_inhib/LTP/seed_sf | InterPro:Bifunc_inhib/LTP/seed_store | GO:GO:0006810 |
| GO:GO:0006869 | GO:GO:0008150 | RefSeq:NP_198633.1 | PFAM:PF14368 | PO:PO:0000084 | PANTHER:PTHR33214 |
| PANTHER:PTHR33214:SF7 | UniProt:Q9FF39 | SMART:SM00499 | SUPFAM:SSF47699 | SignalP:SignalP-noTM | TMHMM:TMhelix |
| UniParc:UPI000000C21F | InterPro:nsLTP2 | SEG:seg | : | : | : |
Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FF39]
Coordinates
chr5:+:15227638..15228081
Molecular Weight (calculated)
10936.4 Da
IEP (calculated)
7.956
GRAVY (calculated)
0.288
Length
103 amino acids
Sequence
(BLAST)
(BLAST)
001: MKFTALVFIV FVVGVMVSPV SIRATEVKLS GGEADVTCDA VQLSSCATPM LTGVPPSTEC CGKLKEQQPC FCTYIKDPRY SQYVGSANAK KTLATCGVPY
101: PTC
101: PTC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.