Factsheet for TraesCS1B01G394700.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G083210.1	Barley	plastid	94.85	74.19
HORVU1Hr1G083180.1	Barley	endoplasmic reticulum, extracellular	90.72	71.54
EES18626	Sorghum	extracellular	75.26	70.19
Os05t0550600-02	Rice	extracellular	68.04	68.75
Zm00001d038913_P001	Maize	endoplasmic reticulum, extracellular	68.04	67.35
TraesCS1B01G394600.1	Wheat	plastid	84.54	56.94
TraesCS1B01G394100.1	Wheat	extracellular	53.61	54.17
TraesCS1B01G394500.1	Wheat	extracellular	53.61	54.17
TraesCS1B01G394400.1	Wheat	extracellular	52.58	53.12
KRH01717	Soybean	extracellular	44.33	45.26
VIT_14s0006g02530.t01	Wine grape	plastid	37.11	44.44
KRH70406	Soybean	extracellular	42.27	43.16
KRH48557	Soybean	extracellular	41.24	43.01
GSMUA_Achr2P06400_001	Banana	extracellular	40.21	42.86
KRH39147	Soybean	extracellular	40.21	41.94
TraesCS4B01G393400.1	Wheat	extracellular	40.21	41.49
VIT_17s0000g03280.t01	Wine grape	extracellular	38.14	40.22
GSMUA_Achr9P18720_001	Banana	extracellular	37.11	39.56
AT1G66850.1	Thale cress	extracellular	40.21	38.24
VIT_14s0006g02550.t01	Wine grape	extracellular	36.08	38.04
Bra040627.1-P	Field mustard	extracellular	37.11	37.89
TraesCS1B01G188600.1	Wheat	extracellular	37.11	37.89
AT1G07747.1	Thale cress	extracellular	37.11	37.89
TraesCS1B01G189600.1	Wheat	extracellular	37.11	37.89
TraesCS1B01G189400.1	Wheat	unclear	35.05	37.36
Bra030699.1-P	Field mustard	extracellular	37.11	37.11
CDY15628	Canola	extracellular	37.11	37.11
CDY61300	Canola	extracellular	37.11	37.11
GSMUA_Achr9P21450_001	Banana	endoplasmic reticulum, plasma membrane, plastid	41.24	37.04
AT5G38160.1	Thale cress	extracellular	39.18	36.89
CDY50600	Canola	extracellular	37.11	36.73
TraesCS5B01G531200.1	Wheat	extracellular, vacuole	37.11	36.73
CDY12591	Canola	extracellular	37.11	36.73
TraesCS4B01G393300.1	Wheat	extracellular, unclear	36.08	36.46
CDY52889	Canola	extracellular	36.08	36.46
TraesCS3B01G294800.1	Wheat	extracellular	36.08	36.46
AT2G14846.1	Thale cress	extracellular	37.11	36.36
TraesCS7B01G312800.1	Wheat	extracellular	35.05	36.17
KRG93187	Soybean	extracellular	36.08	36.08
TraesCS5B01G531100.1	Wheat	extracellular, unclear	34.02	35.87
TraesCS4B01G392800.1	Wheat	extracellular	34.02	35.48
AT1G43666.1	Thale cress	extracellular	35.05	35.42
CDX93624	Canola	extracellular	36.08	35.35
Bra028162.1-P	Field mustard	extracellular	37.11	35.29
CDY61301	Canola	extracellular	38.14	35.24
CDY15627	Canola	extracellular	38.14	35.24
TraesCS7B01G313000.1	Wheat	extracellular	34.02	35.11
KRH56524	Soybean	extracellular	36.08	35.0
AT5G38170.1	Thale cress	extracellular	37.11	34.95
Bra008375.1-P	Field mustard	extracellular	34.02	34.02
CDY26874	Canola	extracellular	34.02	34.02
KRH33571	Soybean	extracellular	35.05	34.0
AT3G57310.1	Thale cress	extracellular	36.08	33.98
AT4G12825.1	Thale cress	extracellular	32.99	33.68
CDX95131	Canola	extracellular	34.02	33.33
TraesCS2B01G537400.1	Wheat	extracellular	34.02	33.33
CDY40472	Canola	extracellular	32.99	32.99
TraesCS3B01G022200.1	Wheat	extracellular	32.99	32.65
AT5G38195.1	Thale cress	extracellular	31.96	32.63
CDX93626	Canola	extracellular	32.99	32.32
CDY12874	Canola	extracellular	31.96	31.96
Bra027114.1-P	Field mustard	extracellular	31.96	31.96
AT1G43667.1	Thale cress	extracellular	30.93	30.61
Bra018687.1-P	Field mustard	extracellular	30.93	30.3
CDX95132	Canola	extracellular	30.93	30.3
Bra033084.1-P	Field mustard	extracellular	30.93	30.0
CDY04056	Canola	extracellular	30.93	29.7
CDY70822	Canola	extracellular	30.93	29.41
AT5G38180.1	Thale cress	extracellular	27.84	28.42
CDY01688	Canola	plastid	36.08	26.52
AT5G38197.1	Thale cress	extracellular	25.77	26.04
AT1G43665.1	Thale cress	extracellular	29.9	23.58
CDY44406	Canola	extracellular	31.96	16.76
Bra033087.1-P	Field mustard	extracellular	31.96	15.2

Protein Annotations

EnsemblPlants:TraesCS1B01G394700.1	EnsemblPlantsGene:TraesCS1B01G394700	Gene3D:1.10.110.10	GO:GO:0006810	GO:GO:0006869	GO:GO:0008150
InterPro:Bifun_inhib/LTP/seed_sf	InterPro:Bifunc_inhib/LTP/seed_store	InterPro:nsLTP2	PANTHER:PTHR33214	PANTHER:PTHR33214:SF5	PFAM:PF14368
SEG:seg	SignalP:SignalP-noTM	SMART:SM00499	SUPFAM:SSF47699	TIGR:cd01959	TMHMM:TMhelix
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr1B:+:626649118..626649411

Molecular Weight (calculated)

9931.5 Da

IEP (calculated)

9.527

GRAVY (calculated)

0.407

Length

97 amino acids

Sequence
(BLAST)

1: MAAKATLVCF MVVALAVALL GAPGAVEAAT CSPTQLTPCA PAIIGNAAPS AACCGKLKAH PASCLCKYKK DPNLQRYVNS PNGKKVFAAC KLRLPRC

Best Arabidopsis Sequence Match ( AT3G18280.1 )
(BLAST)

1: MVMIKTTMVS LFALAAVLLM ILAPAAEAVT CSPMQLSPCA TAITSSSPPS ALCCAKLKEQ RPCLCGYMRN PSLRRFVSTP NARKVSKSCK LPIPRC

Arabidopsis Description

Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LP30]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.