Factsheet for TraesCS2B01G537400.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G510800.1	Wheat	extracellular	84.85	84.0
HORVU2Hr1G108660.1	Barley	extracellular	59.6	62.77
TraesCS1B01G188600.1	Wheat	extracellular	45.45	47.37
TraesCS1B01G189600.1	Wheat	extracellular	43.43	45.26
EES13181	Sorghum	extracellular	39.39	43.82
Zm00001d052759_P001	Maize	extracellular	42.42	43.3
EES08427	Sorghum	endoplasmic reticulum, extracellular	39.39	42.86
OQU75578	Sorghum	endoplasmic reticulum, extracellular	39.39	42.86
OQU83333	Sorghum	endoplasmic reticulum, extracellular	39.39	42.86
TraesCS4A01G424000.1	Wheat	extracellular	38.38	42.7
TraesCS4A01G424100.1	Wheat	extracellular	38.38	42.7
TraesCS4A01G424200.1	Wheat	extracellular	38.38	42.7
OQU75598	Sorghum	extracellular	38.38	41.76
OQU83334	Sorghum	extracellular	38.38	41.76
TraesCS4B01G393300.1	Wheat	extracellular, unclear	37.37	38.54
TraesCS4B01G393400.1	Wheat	extracellular	36.36	38.3
VIT_14s0006g02530.t01	Wine grape	plastid	31.31	38.27
KRH01717	Soybean	extracellular	36.36	37.89
TraesCS5B01G531200.1	Wheat	extracellular, vacuole	37.37	37.76
TraesCS3B01G022200.1	Wheat	extracellular	37.37	37.76
TraesCS1B01G189400.1	Wheat	unclear	34.34	37.36
KRH70406	Soybean	extracellular	35.35	36.84
VIT_14s0006g02550.t01	Wine grape	extracellular	33.33	35.87
VIT_17s0000g03280.t01	Wine grape	extracellular	32.32	34.78
TraesCS7B01G313000.1	Wheat	extracellular	32.32	34.04
TraesCS7B01G312800.1	Wheat	extracellular	32.32	34.04
TraesCS1B01G394700.1	Wheat	extracellular	33.33	34.02
TraesCS4B01G392800.1	Wheat	extracellular	31.31	33.33
TraesCS5B01G531100.1	Wheat	extracellular, unclear	30.3	32.61
KRH39147	Soybean	extracellular	30.3	32.26
Solyc03g034390.1.1	Tomato	extracellular	30.3	31.58
TraesCS1B01G394500.1	Wheat	extracellular	30.3	31.25
TraesCS1B01G394100.1	Wheat	extracellular	30.3	31.25
KRH48557	Soybean	extracellular	29.29	31.18
PGSC0003DMT400056046	Potato	extracellular	31.31	31.0
KRH56524	Soybean	extracellular	31.31	31.0
TraesCS3B01G294800.1	Wheat	extracellular	29.29	30.21
TraesCS1B01G394400.1	Wheat	extracellular	29.29	30.21
KRG93187	Soybean	extracellular	29.29	29.9
KRH33571	Soybean	extracellular	29.29	29.0
TraesCS1B01G394600.1	Wheat	plastid	29.29	20.14

Protein Annotations

EnsemblPlants:TraesCS2B01G537400.1	EnsemblPlantsGene:TraesCS2B01G537400	Gene3D:1.10.110.10	GO:GO:0006810	GO:GO:0006869	GO:GO:0008150
InterPro:Bifun_inhib/LTP/seed_sf	InterPro:Bifunc_inhib/LTP/seed_store	InterPro:nsLTP2	PANTHER:PTHR33214	PANTHER:PTHR33214:SF10	PFAM:PF14368
SEG:seg	SignalP:SignalP-noTM	SMART:SM00499	SUPFAM:SSF47699	TMHMM:TMhelix	MapMan:35.2

Description

No Description!

Coordinates

chr2B:-:732839527..732839826

Molecular Weight (calculated)

10649.4 Da

IEP (calculated)

8.580

GRAVY (calculated)

0.428

Length

99 amino acids

Sequence
(BLAST)

1: MARTVAVLVW VLVIVVVVAG AMAIEPQCPP KKLLPCNPAV KKVKEPSALC CSNLRAQEGC LCLYLHDPRY QRYFGGADAG KTITSCGIPL PYCLSTTNI

Best Arabidopsis Sequence Match ( AT3G18280.2 )
(BLAST)

001: MSKTTTHQKH ISINSETNKR SRRNMVMIKT TMVSLFALAA VLLMILAPAA EAVTCSPMQL SPCATAITSS SPPSALCCAK LKEQRPCLCG YMRNPSLRRF
101: VSTPNARKVS KSCKLPIPRC

Arabidopsis Description

Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LP30]
SUBAcon: [endoplasmic reticulum,plastid,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.