Factsheet for TraesCS4B01G393400.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G032800.1	Wheat	extracellular	91.49	90.53
HORVU4Hr1G089500.1	Barley	extracellular	77.66	73.0
TraesCS4B01G393300.1	Wheat	extracellular, unclear	74.47	72.92
TraesCS5B01G531200.1	Wheat	extracellular, vacuole	73.4	70.41
TraesCS5B01G531100.1	Wheat	extracellular, unclear	65.96	67.39
TraesCS4B01G392800.1	Wheat	extracellular	65.96	66.67
TraesCS1B01G189400.1	Wheat	unclear	53.19	54.95
TraesCS3B01G022200.1	Wheat	extracellular	55.32	53.06
Os03t0111300-01	Rice	extracellular	52.13	51.04
TraesCS1B01G188600.1	Wheat	extracellular	48.94	48.42
TraesCS1B01G189600.1	Wheat	extracellular	48.94	48.42
Zm00001d027332_P001	Maize	extracellular	50.0	47.96
TraesCS1B01G394700.1	Wheat	extracellular	41.49	40.21
KRH01717	Soybean	extracellular	40.43	40.0
VIT_14s0006g02530.t01	Wine grape	plastid	34.04	39.51
TraesCS7B01G313000.1	Wheat	extracellular	38.3	38.3
TraesCS7B01G312800.1	Wheat	extracellular	38.3	38.3
VIT_17s0000g03280.t01	Wine grape	extracellular	37.23	38.04
KRH70406	Soybean	extracellular	38.3	37.89
OQU93402	Sorghum	cytosol	50.0	37.3
KRH48557	Soybean	extracellular	36.17	36.56
KRH39147	Soybean	extracellular	36.17	36.56
TraesCS2B01G537400.1	Wheat	extracellular	38.3	36.36
VIT_14s0006g02550.t01	Wine grape	extracellular	35.11	35.87
TraesCS1B01G394500.1	Wheat	extracellular	36.17	35.42
TraesCS1B01G394400.1	Wheat	extracellular	34.04	33.33
TraesCS1B01G394100.1	Wheat	extracellular	34.04	33.33
Solyc03g034390.1.1	Tomato	extracellular	31.91	31.58
TraesCS3B01G294800.1	Wheat	extracellular	31.91	31.25
PGSC0003DMT400056046	Potato	extracellular	32.98	31.0
KRH56524	Soybean	extracellular	32.98	31.0
KRG93187	Soybean	extracellular	31.91	30.93
KRH33571	Soybean	extracellular	31.91	30.0
TraesCS1B01G394600.1	Wheat	plastid	37.23	24.31

Protein Annotations

EnsemblPlants:TraesCS4B01G393400.1	EnsemblPlantsGene:TraesCS4B01G393400	Gene3D:1.10.110.10	GO:GO:0006810	GO:GO:0006869	GO:GO:0008150
InterPro:Bifun_inhib/LTP/seed_sf	InterPro:Bifunc_inhib/LTP/seed_store	InterPro:nsLTP2	PANTHER:PTHR33214	PANTHER:PTHR33214:SF18	PFAM:PF14368
SEG:seg	SignalP:SignalP-noTM	SMART:SM00499	SUPFAM:SSF47699	TIGR:cd01959	MapMan:35.1

Description

No Description!

Coordinates

chr4B:-:667859023..667859307

Molecular Weight (calculated)

9920.3 Da

IEP (calculated)

8.212

GRAVY (calculated)

0.262

Length

94 amino acids

Sequence
(BLAST)

1: MAMRKEAVPV VAVMLMLVVL APGKARAACE VTQLAVCASA ILGGTKPSGE CCGNLRAQQG CFCQYVKDPN YGHYVNSPHA RETLQTCGIA LPHC

Best Arabidopsis Sequence Match ( AT5G38170.1 )
(BLAST)

001: MKFTALVFIV FVVGVMVSPV SIRATEVKLS GGEADVTCDA VQLSSCATPM LTGVPPSTEC CGKLKEQQPC FCTYIKDPRY SQYVGSANAK KTLATCGVPY
101: PTC

Arabidopsis Description

Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FF39]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.