CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75963	Canola	extracellular	97.92	97.92
Bra001701.1-P	Field mustard	extracellular	96.88	96.88
CDY24453	Canola	extracellular	84.38	84.38
CDX92224	Canola	extracellular	83.33	83.33
CDY48021	Canola	endoplasmic reticulum, extracellular, plasma membrane	83.33	83.33
CDX95546	Canola	endoplasmic reticulum, extracellular, plasma membrane	83.33	83.33
CDY04317	Canola	extracellular	69.79	69.07
CDY32103	Canola	extracellular	67.71	67.01
CDY40833	Canola	extracellular	67.71	67.01
CDY68337	Canola	extracellular	66.67	65.98
CDY16462	Canola	extracellular	59.38	58.76
CDX77289	Canola	extracellular	59.38	58.76
VIT_14s0006g02530.t01	Wine grape	plastid	45.83	54.32
KRH01717	Soybean	extracellular	50.0	50.53
PGSC0003DMT400056028	Potato	extracellular	47.92	50.0
KRH70406	Soybean	extracellular	48.96	49.47
PGSC0003DMT400067824	Potato	extracellular	47.92	48.94
Solyc02g086310.1.1	Tomato	extracellular	47.92	48.94
VIT_14s0006g02550.t01	Wine grape	extracellular	42.71	44.57
CDY12591	Canola	extracellular	44.79	43.88
CDY50600	Canola	extracellular	44.79	43.88
CDY52889	Canola	extracellular	42.71	42.71
CDY15628	Canola	extracellular	39.58	39.18
CDY61300	Canola	extracellular	39.58	39.18
CDY60143	Canola	extracellular	38.54	38.14
CDY61301	Canola	extracellular	40.62	37.14
CDY40472	Canola	extracellular	37.5	37.11
CDY12874	Canola	extracellular	37.5	37.11
CDX95132	Canola	extracellular	37.5	36.36
CDY15627	Canola	extracellular	39.58	36.19
CDY47738	Canola	extracellular	36.46	35.71
CDY45874	Canola	extracellular	36.46	35.71
CDX93624	Canola	extracellular	36.46	35.35
CDY26874	Canola	extracellular	35.42	35.05
CDX93626	Canola	extracellular	34.38	33.33
CDX95131	Canola	extracellular	33.33	32.32
CDY01688	Canola	plastid	41.67	30.3
CDY04056	Canola	extracellular	31.25	29.7
CDY70822	Canola	extracellular	27.08	25.49
CDY44406	Canola	extracellular	32.29	16.76

Protein Annotations

EnsemblPlants:CDY51937	EnsemblPlantsGene:GSBRNA2T00004526001	Gene3D:1.10.110.10	GO:GO:0006810	GO:GO:0006869	GO:GO:0008150
InterPro:Bifun_inhib/LTP/seed_sf	InterPro:Bifunc_inhib/LTP/seed_store	InterPro:nsLTP2	PANTHER:PTHR33214	PANTHER:PTHR33214:SF19	PFAM:PF14368
ProteinID:CDY51937	ProteinID:CDY51937.1	SEG:seg	SignalP:SignalP-noTM	SMART:SM00499	SUPFAM:SSF47699
TMHMM:TMhelix	UniParc:UPI0004EDC2BB	UniProt:A0A078IPU8	MapMan:35.2	:	:

Description

BnaAnng11140DBnaAnng11140D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IPU8]

Coordinates

chrLK033040:+:76894..77379

Molecular Weight (calculated)

10306.0 Da

IEP (calculated)

9.547

GRAVY (calculated)

0.438

Length

96 amino acids

Sequence
(BLAST)

1: MLMVKATWVS ILALAAFLLV VLVPAAEAVT CSPMQLSPCA AAITSSSPPS ALCCAKLKEQ KPCICGYMRN PSLRRYISSP NARKVSNTCK FPMPRC

Best Arabidopsis Sequence Match ( AT3G18280.2 )
(BLAST)

001: MSKTTTHQKH ISINSETNKR SRRNMVMIKT TMVSLFALAA VLLMILAPAA EAVTCSPMQL SPCATAITSS SPPSALCCAK LKEQRPCLCG YMRNPSLRRF
101: VSTPNARKVS KSCKLPIPRC

Arabidopsis Description

Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LP30]
SUBAcon: [endoplasmic reticulum,plastid,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.