Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 7
- golgi 5
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER91405 | Sorghum | extracellular | 72.63 | 70.41 |
| Os10t0505700-01 | Rice | extracellular, nucleus, plastid | 56.84 | 59.34 |
| TraesCS1D01G163900.1 | Wheat | unclear | 53.68 | 56.04 |
| TraesCS1B01G189400.1 | Wheat | unclear | 53.68 | 56.04 |
| TraesCS1A01G175200.1 | Wheat | extracellular, plastid | 48.42 | 54.12 |
| EES13181 | Sorghum | extracellular | 47.37 | 50.56 |
| KRH01717 | Soybean | extracellular | 45.26 | 45.26 |
| EES08427 | Sorghum | endoplasmic reticulum, extracellular | 41.05 | 42.86 |
| OQU83334 | Sorghum | extracellular | 41.05 | 42.86 |
| OQU83333 | Sorghum | endoplasmic reticulum, extracellular | 41.05 | 42.86 |
| OQU75598 | Sorghum | extracellular | 41.05 | 42.86 |
| OQU75578 | Sorghum | endoplasmic reticulum, extracellular | 41.05 | 42.86 |
| KRH70406 | Soybean | extracellular | 42.11 | 42.11 |
| HORVU1Hr1G046400.1 | Barley | cytosol, plasma membrane, plastid | 51.58 | 40.16 |
| VIT_14s0006g02530.t01 | Wine grape | plastid | 32.63 | 38.27 |
| VIT_17s0000g03280.t01 | Wine grape | extracellular | 35.79 | 36.96 |
| Solyc03g034390.1.1 | Tomato | extracellular | 36.84 | 36.84 |
| KRH48557 | Soybean | extracellular | 35.79 | 36.56 |
| EES18625 | Sorghum | extracellular | 36.84 | 36.08 |
| OQU93402 | Sorghum | cytosol | 47.37 | 35.71 |
| KRH39147 | Soybean | extracellular | 34.74 | 35.48 |
| EES18626 | Sorghum | extracellular | 37.89 | 34.62 |
| KRG93187 | Soybean | extracellular | 34.74 | 34.02 |
| KRH56524 | Soybean | extracellular | 35.79 | 34.0 |
| VIT_14s0006g02550.t01 | Wine grape | extracellular | 32.63 | 33.7 |
| PGSC0003DMT400056046 | Potato | extracellular | 34.74 | 33.0 |
| KRH33571 | Soybean | extracellular | 33.68 | 32.0 |
| OQU77036 | Sorghum | extracellular | 33.68 | 19.05 |
Protein Annotations
| Gene3D:1.10.110.10 | MapMan:35.2 | EntrezGene:8067073 | InterPro:Bifun_inhib/LTP/seed_sf | InterPro:Bifunc_inhib/LTP/seed_store | UniProt:C5WWD2 |
| EnsemblPlants:EER91406 | ProteinID:EER91406 | ProteinID:EER91406.1 | GO:GO:0006810 | GO:GO:0006869 | GO:GO:0008150 |
| PFAM:PF14368 | PANTHER:PTHR33214 | PANTHER:PTHR33214:SF10 | SMART:SM00499 | EnsemblPlantsGene:SORBI_3001G200900 | SUPFAM:SSF47699 |
| SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0001A82426 | RefSeq:XP_002464408.1 | InterPro:nsLTP2 | SEG:seg |
Description
hypothetical protein
Coordinates
chr1:+:18194042..18194584
Molecular Weight (calculated)
9628.7 Da
IEP (calculated)
7.636
GRAVY (calculated)
0.463
Length
95 amino acids
Sequence
(BLAST)
(BLAST)
1: MAKQAVAMLV ALALVVAAAM SAGGASAVQC NPAQLVVCAP AVINGSPPTA SCCSNLRAQE SCFCEYAHNP AFRKYIDSPN AGRTLTSCGI PIPDC
001: MSKTTTHQKH ISINSETNKR SRRNMVMIKT TMVSLFALAA VLLMILAPAA EAVTCSPMQL SPCATAITSS SPPSALCCAK LKEQRPCLCG YMRNPSLRRF
101: VSTPNARKVS KSCKLPIPRC
101: VSTPNARKVS KSCKLPIPRC
Arabidopsis Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LP30]
SUBAcon: [endoplasmic reticulum,plastid,extracellular,plasma membrane]
SUBAcon: [endoplasmic reticulum,plastid,extracellular,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.