Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- cytosol 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G096100.1 | Wheat | cytosol | 86.22 | 54.87 |
| TraesCS3B01G096600.1 | Wheat | cytosol | 91.33 | 54.74 |
| TraesCS3B01G096800.1 | Wheat | cytosol | 88.78 | 53.37 |
| HORVU3Hr1G014590.4 | Barley | cytosol | 81.63 | 46.11 |
| TraesCS6A01G404700.1 | Wheat | cytosol | 54.59 | 35.2 |
| TraesCS7A01G126500.1 | Wheat | cytosol | 55.1 | 33.64 |
| TraesCS4A01G315000.1 | Wheat | cytosol | 55.61 | 33.44 |
| TraesCS6A01G396400.1 | Wheat | cytosol | 54.08 | 33.12 |
| TraesCS4A01G093600.1 | Wheat | cytosol | 53.57 | 32.71 |
| TraesCS1A01G095500.1 | Wheat | cytosol | 52.04 | 31.38 |
| TraesCS3A01G195500.1 | Wheat | cytosol | 50.51 | 28.61 |
| TraesCS5A01G455000.1 | Wheat | cytosol | 37.24 | 25.8 |
| TraesCS5A01G176800.1 | Wheat | cytosol | 39.8 | 25.41 |
| TraesCS6A01G183700.1 | Wheat | cytosol | 37.24 | 23.86 |
| TraesCS5A01G270900.1 | Wheat | cytosol | 37.24 | 23.78 |
| TraesCS7A01G364400.1 | Wheat | cytosol | 36.73 | 23.61 |
| TraesCS3A01G261200.1 | Wheat | cytosol | 36.22 | 23.43 |
| TraesCS4A01G020400.1 | Wheat | cytosol | 36.73 | 22.43 |
| TraesCS1A01G373300.1 | Wheat | cytosol | 36.73 | 20.11 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G081200.1 | EnsemblPlantsGene:TraesCS3A01G081200 | Gene3D:3.60.21.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016787 |
| InterPro:Calcineurin-like_PHP_ApaH | InterPro:IPR029052 | InterPro:Metallo-depent_PP-like | InterPro:Ser/Thr-sp_prot-phosphatase | KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 |
| PANTHER:PTHR11668 | PANTHER:PTHR11668:SF321 | PFAM:PF00149 | PRINTS:PR00114 | ScanProsite:PS00125 | SEG:seg |
| SMART:SM00156 | SUPFAM:SSF56300 | MapMan:50.3.1 | : | : | : |
Description
No Description!
Coordinates
chr3A:-:52548061..52555372
Molecular Weight (calculated)
21409.6 Da
IEP (calculated)
5.924
GRAVY (calculated)
-0.136
Length
196 amino acids
Sequence
(BLAST)
(BLAST)
001: MLETICLLLA YKLKYPGAFF LRGNHECAAV NKQYGFYSQC ASRGPRKKIL CVHGGLSPEL ESPDHIREIK RPLADVPDSG LVCDLLWSDP AADGDNWGWG
101: DPRRCTSFTF GADVVEEFCE RHGLAMVCRA HEMKEGGYDQ EFAGGKLVTV FSAPNYCGKC GNDGAIMTVA GDLACSFRVF HPDTAATPPP APIYLL
101: DPRRCTSFTF GADVVEEFCE RHGLAMVCRA HEMKEGGYDQ EFAGGKLVTV FSAPNYCGKC GNDGAIMTVA GDLACSFRVF HPDTAATPPP APIYLL
001: MEDSVVDDVI KRLLGAKNGK TTKQVQLTEA EIKHLCSTAK QIFLTQPNLL ELEAPIKICG DTHGQFSDLL RLFEYGGYPP AANYLFLGDY VDRGKQSVET
101: ICLLLAYKIK YKENFFLLRG NHECASINRI YGFYDECKKR YSVRVWKIFT DCFNCLPVAA LIDEKILCMH GGLSPELKHL DEIRNIPRPA DIPDHGLLCD
201: LLWSDPDKDI EGWGENDRGV SYTFGADKVE EFLQTHDLDL ICRAHQVVED GYEFFANRQL VTIFSAPNYC GEFDNAGAMM SVDDSLTCSF QILKASEKKG
301: NFGFGKNAGR RGTPPRKGGG KG
101: ICLLLAYKIK YKENFFLLRG NHECASINRI YGFYDECKKR YSVRVWKIFT DCFNCLPVAA LIDEKILCMH GGLSPELKHL DEIRNIPRPA DIPDHGLLCD
201: LLWSDPDKDI EGWGENDRGV SYTFGADKVE EFLQTHDLDL ICRAHQVVED GYEFFANRQL VTIFSAPNYC GEFDNAGAMM SVDDSLTCSF QILKASEKKG
301: NFGFGKNAGR RGTPPRKGGG KG
Arabidopsis Description
TOPP3Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178WMA0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.