Factsheet for TraesCS4A01G093600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G211500.1	Wheat	cytosol	100.0	100.0
TraesCS4B01G210800.1	Wheat	cytosol	99.69	99.69
HORVU4Hr1G060490.1	Barley	cytosol	99.38	99.38
Os03t0268000-01	Rice	cytosol	96.57	96.27
HORVU4Hr1G060530.1	Barley	mitochondrion, peroxisome	91.9	94.86
EER95117	Sorghum	cytosol	94.39	94.1
Zm00001d047835_P003	Maize	cytosol, extracellular, plasma membrane	93.15	92.57
KRH73092	Soybean	cytosol, nucleus	87.85	89.24
CDY61002	Canola	cytosol	88.16	88.99
KRH15048	Soybean	cytosol	86.92	88.57
Solyc06g030490.2.1	Tomato	cytosol	83.8	88.49
PGSC0003DMT400017290	Potato	cytosol	83.8	88.49
CDY24946	Canola	cytosol	87.54	88.36
AT2G39840.1	Thale cress	cytosol	88.16	88.16
CDY20490	Canola	cytosol	85.67	87.58
VIT_13s0019g02410.t01	Wine grape	cytosol	85.36	87.54
VIT_06s0004g05530.t01	Wine grape	cytosol	81.93	87.38
CDY10577	Canola	cytosol	78.82	86.94
GSMUA_Achr8P19510_001	Banana	cytosol	75.39	86.74
CDY71651	Canola	cytosol	59.5	86.43
CDX88683	Canola	cytosol	83.18	86.41
AT5G59160.1	Thale cress	cytosol	83.8	86.22
Bra005009.1-P	Field mustard	cytosol	77.88	86.21
Solyc06g076430.2.1	Tomato	cytosol, nucleus	82.87	85.81
CDX71136	Canola	cytosol	82.55	85.76
CDY32662	Canola	cytosol	83.18	85.58
Bra020335.1-P	Field mustard	cytosol	83.18	85.58
Bra002590.1-P	Field mustard	cytosol	82.87	85.53
PGSC0003DMT400078199	Potato	cytosol	82.55	85.48
Bra006731.1-P	Field mustard	cytosol	82.24	85.44
CDY33013	Canola	cytosol	80.37	84.31
CDX80301	Canola	cytosol	79.75	83.66
CDY02866	Canola	cytosol	83.49	82.97
Solyc06g005800.2.1	Tomato	cytosol, nucleus	82.24	82.76
AT2G29400.1	Thale cress	cytosol	81.62	82.39
AT3G46820.1	Thale cress	cytosol	80.06	82.37
Bra018397.1-P	Field mustard	cytosol	78.19	82.3
Bra018191.1-P	Field mustard	cytosol	79.44	82.26
Bra000475.1-P	Field mustard	cytosol	80.37	81.13
CDX83308	Canola	cytosol	80.37	81.13
CDY40180	Canola	cytosol	80.06	81.07
TraesCS6A01G396400.1	Wheat	cytosol	80.37	80.62
CDX95749	Canola	cytosol	80.06	80.31
CDY45437	Canola	cytosol	79.75	80.25
PGSC0003DMT400053683	Potato	cytosol	65.11	80.08
CDX86100	Canola	cytosol	76.01	79.74
TraesCS7A01G126500.1	Wheat	cytosol	79.13	79.13
TraesCS6A01G404700.1	Wheat	cytosol	74.45	78.62
Zm00001d028568_P004	Maize	cytosol	95.64	74.88
TraesCS4A01G315000.1	Wheat	cytosol	71.65	70.55
TraesCS1A01G095500.1	Wheat	cytosol	69.78	68.92
TraesCS3A01G195500.1	Wheat	cytosol	69.78	64.74
Bra000153.1-P	Field mustard	cytosol	88.16	57.76
TraesCS3A01G081200.1	Wheat	cytosol	32.71	53.57
TraesCS5A01G455000.1	Wheat	cytosol	39.25	44.52
TraesCS6A01G183700.1	Wheat	cytosol	41.74	43.79
TraesCS5A01G270900.1	Wheat	cytosol	41.74	43.65
TraesCS5A01G176800.1	Wheat	cytosol	41.43	43.32
TraesCS7A01G364400.1	Wheat	cytosol	41.12	43.28
TraesCS4A01G020400.1	Wheat	cytosol	40.5	40.5
TraesCS3A01G261200.1	Wheat	cytosol	37.69	39.93
TraesCS1A01G373300.1	Wheat	cytosol	37.07	33.24
CDX89311	Canola	cytosol, plastid	26.17	12.17

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.1.1	Gene3D:3.60.21.10	InterPro:Calcineurin-like_PHP_ApaH	GO:GO:0003674
GO:GO:0003824	GO:GO:0016787	InterPro:IPR029052	InterPro:Metallo-depent_PP-like	PFAM:PF00149	PFAM:PF16891
PRINTS:PR00114	ScanProsite:PS00125	PANTHER:PTHR11668	PANTHER:PTHR11668:SF403	SMART:SM00156	SUPFAM:SSF56300
InterPro:STPPase_N	InterPro:Ser/Thr-sp_prot-phosphatase	EnsemblPlantsGene:TraesCS4A01G093600	EnsemblPlants:TraesCS4A01G093600.1	TIGR:cd07414	SEG:seg

Description

No Description!

Coordinates

chr4A:+:101402781..101405128

Molecular Weight (calculated)

36172.6 Da

IEP (calculated)

4.980

GRAVY (calculated)

-0.138

Length

321 amino acids

Sequence
(BLAST)

001: MAAAPAAGGQ GGGMDAALLD DIIRRLLEVR TARPGKQVQL SESEIRQLCT ASRDIFLTQP NLLELEAPIK ICGDIHGQYS DLLRLFEYGG FPPEANYLFL
101: GDYVDRGKQS LETICLLLAY KIKYPENFFL LRGNHECASI NRIYGFYDEC KRRFNVRLWK VFTDCFNCLP VAALIDDKIL CMHGGLSPDL GHLDEIKNLP
201: RPTDVPDTGL LCDLLWSDPG KDVQGWGMND RGVSYTFGHD KVTEFLLKHD LDLICRAHQV VEDGYEFFAD RQLVTIFSAP NYCGEFDNAG AMMSVDETLM
301: CSFQILKPAE RKIKFMASNK M

Best Arabidopsis Sequence Match ( AT2G39840.1 )
(BLAST)

001: MATTTTTQGQ QTAIDSAVLD DIIRRLTEVR LARPGKQVQL SEAEIKQLCT TARDIFLQQP NLLELEAPIK ICGDIHGQYS DLLRLFEYGG FPPSANYLFL
101: GDYVDRGKQS LETICLLLAY KIKYPGNFFL LRGNHECASI NRIYGFYDEC KRRFNVRVWK VFTDCFNCLP VAALIDDKIL CMHGGLSPDL DHLDEIRNLP
201: RPTMIPDTGL LCDLLWSDPG KDVKGWGMND RGVSYTFGPD KVSEFLTKHD LDLVCRAHQV VEDGYEFFAD RQLVTVFSAP NYCGEFDNAG AMMSVDENLM
301: CSFQILKPAE KKTKFMMSTK I

Arabidopsis Description

TOPP4Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178VUA1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.