Factsheet for Zm00001d047835_P003

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol, plasma membrane

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, plasma membrane
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 20408568
plasma membrane: 27341663

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER95117	Sorghum	cytosol	94.12	94.41
Os03t0268000-01	Rice	cytosol	93.19	93.48
TraesCS4D01G211500.1	Wheat	cytosol	92.57	93.15
TraesCS4A01G093600.1	Wheat	cytosol	92.57	93.15
HORVU4Hr1G060490.1	Barley	cytosol	92.57	93.15
TraesCS4B01G210800.1	Wheat	cytosol	92.26	92.83
HORVU4Hr1G060530.1	Barley	mitochondrion, peroxisome	85.76	89.07
KRH73092	Soybean	cytosol, nucleus	84.21	86.08
CDY61002	Canola	cytosol	84.52	85.85
VIT_06s0004g05530.t01	Wine grape	cytosol	79.88	85.71
GSMUA_Achr8P19510_001	Banana	cytosol	73.99	85.66
PGSC0003DMT400017290	Potato	cytosol	80.5	85.53
Solyc06g030490.2.1	Tomato	cytosol	80.5	85.53
CDY24946	Canola	cytosol	83.9	85.22
KRH15048	Soybean	cytosol	82.97	85.08
CDY71651	Canola	cytosol	58.2	85.07
AT2G39840.1	Thale cress	cytosol	84.52	85.05
VIT_13s0019g02410.t01	Wine grape	cytosol	82.35	84.98
AT5G59160.1	Thale cress	cytosol	81.73	84.62
Bra002590.1-P	Field mustard	cytosol	81.42	84.57
Solyc06g076430.2.1	Tomato	cytosol, nucleus	81.11	84.52
CDX88683	Canola	cytosol	80.81	84.47
CDY20490	Canola	cytosol	82.04	84.39
Bra020335.1-P	Field mustard	cytosol	81.42	84.29
CDY32662	Canola	cytosol	81.42	84.29
PGSC0003DMT400078199	Potato	cytosol	80.81	84.19
Bra006731.1-P	Field mustard	cytosol	80.5	84.14
CDX71136	Canola	cytosol	80.19	83.82
CDY10577	Canola	cytosol	75.23	83.51
CDY33013	Canola	cytosol	78.64	83.01
Bra005009.1-P	Field mustard	cytosol	74.3	82.76
CDX80301	Canola	cytosol	78.02	82.35
Solyc06g005800.2.1	Tomato	cytosol, nucleus	80.81	81.82
CDY02866	Canola	cytosol	81.73	81.73
Bra018397.1-P	Field mustard	cytosol	76.78	81.31
AT2G29400.1	Thale cress	cytosol	79.88	81.13
AT3G46820.1	Thale cress	cytosol	78.33	81.09
Bra018191.1-P	Field mustard	cytosol	77.71	80.97
CDX83308	Canola	cytosol	78.95	80.19
Bra000475.1-P	Field mustard	cytosol	78.95	80.19
CDY40180	Canola	cytosol	78.64	80.13
CDX95749	Canola	cytosol	78.64	79.38
Zm00001d051898_P001	Maize	cytosol	61.92	79.05
CDY45437	Canola	cytosol	78.02	79.0
PGSC0003DMT400053683	Potato	cytosol	63.78	78.93
CDX86100	Canola	cytosol	74.3	78.43
Zm00001d032076_P002	Maize	cytosol	73.06	77.63
Zm00001d018503_P002	Maize	cytosol	62.54	75.94
Zm00001d028568_P004	Maize	cytosol	95.05	74.88
Zm00001d036285_P001	Maize	cytosol, extracellular	74.61	74.38
Zm00001d045213_P004	Maize	cytosol	74.3	74.07
Zm00001d037601_P001	Maize	cytosol	63.16	68.0
Zm00001d009844_P001	Maize	cytosol	68.11	65.09
Bra000153.1-P	Field mustard	cytosol	84.83	55.92
Zm00001d053539_P001	Maize	cytosol	45.51	52.13
Zm00001d009181_P005	Maize	cytosol	56.04	49.18
Zm00001d013047_P002	Maize	cytosol, plasma membrane	41.8	43.97
Zm00001d034517_P001	Maize	cytosol, extracellular, mitochondrion	41.49	43.65
Zm00001d005110_P001	Maize	cytosol	33.13	43.15
Zm00001d046369_P002	Maize	cytosol	40.87	43.14
Zm00001d027826_P001	Maize	cytosol	40.56	41.85
Zm00001d016378_P002	Maize	cytosol	40.87	39.05
Zm00001d036949_P007	Maize	cytosol	37.15	38.96
Zm00001d046377_P001	Maize	mitochondrion	36.84	38.51
Zm00001d048336_P003	Maize	cytosol	40.25	38.35
Zm00001d011634_P003	Maize	cytosol	35.6	37.95
Zm00001d032989_P003	Maize	cytosol	40.56	33.85
Zm00001d053589_P001	Maize	cytosol	30.34	31.11
CDX89311	Canola	cytosol, plastid	25.08	11.74

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100272981	MapMan:18.4.24.1.1	Gene3D:3.60.21.10	ProteinID:AQL07755.1
ProteinID:AQL07756.1	ProteinID:AQL07757.1	ProteinID:AQL07758.1	UniProt:B4FS28	EMBL:BT039916	InterPro:Calcineurin-like_PHP_ApaH
GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0046872
InterPro:IPR029052	InterPro:Metallo-depent_PP-like	PFAM:PF00149	PFAM:PF16891	PRINTS:PR00114	ScanProsite:PS00125
PANTHER:PTHR11668	PANTHER:PTHR11668:SF403	SMART:SM00156	SUPFAM:SSF56300	InterPro:STPPase_N	InterPro:Ser/Thr-sp_prot-phosphatase
UniParc:UPI00017B7D97	EnsemblPlantsGene:Zm00001d047835	EnsemblPlants:Zm00001d047835_P003	EnsemblPlants:Zm00001d047835_T003	SEG:seg	:

Description

Serine/threonine-protein phosphatase PP1 isozyme 2

Coordinates

chr9:-:142826436..142832862

Molecular Weight (calculated)

36351.6 Da

IEP (calculated)

4.979

GRAVY (calculated)

-0.176

Length

323 amino acids

Sequence
(BLAST)

001: MSAAPAAGGQ GGGGIDAALL DDIIRRLLEV RTARPGKQVQ LSESEIRQLC TVSRAIFLSQ PNLLELEAPI KICGDIHGQY SDLLRLFEYG GFPPEANYLF
101: LGDYVDRGKQ SLETICLLLA YKIKYPENFF LLRGNHECAS INRIYGFYDE CKRRFNVRLW KVFTECFNTL PVAALIDDKI LCMHGGLSPD LAHLDEIKNL
201: QRPTDVPDQG LLCDLLWSDP GKDVQGWGMN DRGVSYTFGA DKVSEFLQRH DLDLICRAHQ VVEDGYEFFA DRQLVTIFSA PNYCGEFDNA GAMMSVDETL
301: MCSFQILKPA ERKQIYGAKQ NVR

Best Arabidopsis Sequence Match ( AT2G39840.1 )
(BLAST)

001: MATTTTTQGQ QTAIDSAVLD DIIRRLTEVR LARPGKQVQL SEAEIKQLCT TARDIFLQQP NLLELEAPIK ICGDIHGQYS DLLRLFEYGG FPPSANYLFL
101: GDYVDRGKQS LETICLLLAY KIKYPGNFFL LRGNHECASI NRIYGFYDEC KRRFNVRVWK VFTDCFNCLP VAALIDDKIL CMHGGLSPDL DHLDEIRNLP
201: RPTMIPDTGL LCDLLWSDPG KDVKGWGMND RGVSYTFGPD KVSEFLTKHD LDLVCRAHQV VEDGYEFFAD RQLVTVFSAP NYCGEFDNAG AMMSVDENLM
301: CSFQILKPAE KKTKFMMSTK I

Arabidopsis Description

TOPP4Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178VUA1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.