Factsheet for Zm00001d053589_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d018045_P001
Zm00001d037221_P001
Zm00001d044836_P001
Zm00001d052256_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G10430.1	Zm00001d018045_P001	AT3G47620.1	21798944
AT1G10430.1	Zm00001d037221_P001	AT3G47620.1	21798944
AT1G10430.1	Zm00001d044836_P001	AT3G47620.1	21798944
AT1G10430.1	Zm00001d052256_P001	AT3G47620.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G171400.1	Wheat	cytosol	64.13	66.01
TraesCS6B01G213200.1	Wheat	cytosol	64.13	66.01
TraesCS6A01G183700.1	Wheat	cytosol	64.13	66.01
Zm00001d046369_P002	Maize	cytosol	63.81	65.69
Os02t0217600-02	Rice	cytosol, plasma membrane	63.49	65.15
PGSC0003DMT400004853	Potato	cytosol	61.59	63.4
Solyc05g006590.2.1	Tomato	cytosol	61.27	63.07
PGSC0003DMT400058216	Potato	cytosol	61.27	63.07
CDY52461	Canola	cytosol	61.27	63.07
AT1G59830.1	Thale cress	cytosol	60.95	62.75
CDY38778	Canola	cytosol	60.95	62.75
CDY37977	Canola	cytosol	60.95	62.75
CDY30909	Canola	cytosol	60.95	62.75
CDY11632	Canola	cytosol	60.95	62.75
CDY34892	Canola	cytosol	60.95	62.75
Bra016247.1-P	Field mustard	cytosol	60.95	62.75
CDY07799	Canola	cytosol	60.95	62.75
CDX93426	Canola	cytosol	60.95	62.75
GSMUA_Achr7P23950_001	Banana	cytosol	60.63	62.42
Bra019934.1-P	Field mustard	cytosol	60.63	62.42
Bra031712.1-P	Field mustard	cytosol	60.63	62.42
CDY45151	Canola	cytosol	60.32	62.09
AT1G10430.1	Thale cress	cytosol	60.32	62.09
Bra027833.1-P	Field mustard	cytosol	60.32	62.09
KRH69421	Soybean	cytosol, nucleus	60.32	62.09
Solyc01g011340.2.1	Tomato	cytosol, plastid	60.32	62.09
PGSC0003DMT400013570	Potato	cytosol	60.32	62.09
VIT_17s0000g05330.t01	Wine grape	cytosol	60.0	61.76
KRH45793	Soybean	cytosol, nucleus	60.0	61.76
KRG99209	Soybean	cytosol, nucleus	60.0	61.76
AT1G69960.1	Thale cress	cytosol	60.0	61.56
KRH74722	Soybean	cytosol, nucleus	59.68	61.44
Zm00001d016378_P002	Maize	cytosol	65.71	61.24
VIT_01s0026g01080.t01	Wine grape	cytosol	59.37	61.11
VIT_14s0066g02240.t01	Wine grape	cytosol	59.05	60.78
Zm00001d013047_P002	Maize	cytosol, plasma membrane	53.97	55.37
Zm00001d034517_P001	Maize	cytosol, extracellular, mitochondrion	53.65	55.05
Zm00001d027826_P001	Maize	cytosol	53.65	53.99
Zm00001d036949_P007	Maize	cytosol	52.7	53.9
HORVU6Hr1G038770.1	Barley	cytosol	64.13	53.02
Zm00001d048336_P003	Maize	cytosol	53.33	49.56
GSMUA_Achr3P20430_001	Banana	plastid	51.11	45.61
Zm00001d011634_P003	Maize	cytosol	42.22	43.89
Zm00001d032989_P003	Maize	cytosol	53.65	43.67
Zm00001d005110_P001	Maize	cytosol	33.97	43.15
GSMUA_AchrUn_...	Banana	cytosol	59.68	39.66
Zm00001d051898_P001	Maize	cytosol	30.79	38.34
Zm00001d018503_P002	Maize	cytosol	30.79	36.47
Zm00001d032076_P002	Maize	cytosol	33.02	34.21
Zm00001d009844_P001	Maize	cytosol	33.65	31.36
Zm00001d036285_P001	Maize	cytosol, extracellular	31.43	30.56
Zm00001d045213_P004	Maize	cytosol	31.43	30.56
Zm00001d047835_P003	Maize	cytosol, extracellular, plasma membrane	31.11	30.34
Zm00001d037601_P001	Maize	cytosol	28.57	30.0
Zm00001d009181_P005	Maize	cytosol	31.43	26.9
Zm00001d053539_P001	Maize	cytosol	21.59	24.11
Zm00001d028568_P004	Maize	cytosol	31.11	23.9
Zm00001d046377_P001	Maize	mitochondrion	16.19	16.5

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100273101	MapMan:50.3.1	UniProt:A0A1D6QQF8	ProteinID:AQK59767.1
InterPro:Calcineurin-like_PHP_ApaH	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0005575	GO:GO:0006464
GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0019538	PFAM:PF00149	PRINTS:PR00114	ScanProsite:PS00125	PANTHER:PTHR11668
PANTHER:PTHR11668:SF248	SMART:SM00156	SUPFAM:SSF56300	InterPro:Ser/Thr-sp_prot-phosphatase	TMHMM:TMhelix	UniParc:UPI0008444810
EnsemblPlantsGene:Zm00001d053589	EnsemblPlants:Zm00001d053589_P001	EnsemblPlants:Zm00001d053589_T001	SEG:seg	:	:

Description

Serine/threonine-protein phosphatase

Coordinates

chr4:+:235580791..235589680

Molecular Weight (calculated)

35153.5 Da

IEP (calculated)

4.842

GRAVY (calculated)

0.131

Length

315 amino acids

Sequence
(BLAST)

001: MPSHGDLDRQ IAQLRDCKYL PEAEVKVLCE QAKAILMEEW NVQPVRCPVT VCGDIHGQFY DLIELFRIGG DSPDTNYLFM GDYVDRGYYS VETVSLLVAL
101: KVRYRDRITI LRGNHESRQI TQVYGFYDEC LRKYGNANVW KYFTDLFDYL PLTALIENQV FCLHGGLSPS LDTLDNIRSL DRIQEPWASQ NHIFTPFPPI
201: EPAATLKRAA GSNYGAHGPS ACACRFPSLL WPDPDLSTNL QWLPLLPGAD LPLLSATIAG GWVPSCSLQA VLDSTDACWA PSILKISFAL VPCLALALLL
301: LLLILPHALL LLLSD

Best Arabidopsis Sequence Match ( AT1G10430.1 )
(BLAST)

001: MPSNGDLDRQ IEQLMECKPL SEADVRTLCD QARAILVEEY NVQPVKCPVT VCGDIHGQFY DLIELFRIGG NAPDTNYLFM GDYVDRGYYS VETVSLLVAL
101: KVRYRDRLTI LRGNHESRQI TQVYGFYDEC LRKYGNANVW KYFTDLFDYL PLTALIESQV FCLHGGLSPS LDTLDNIRSL DRIQEVPHEG PMCDLLWSDP
201: DDRCGWGISP RGAGYTFGQD IAAQFNHNNG LSLISRAHQL VMEGFNWCQD KNVVTVFSAP NYCYRCGNMA AILEIGENME QNFLQFDPAP RQVEPDTTRK
301: TPDYFL

Arabidopsis Description

PP2A2Serine/threonine-protein phosphatase PP2A-2 catalytic subunit [Source:UniProtKB/Swiss-Prot;Acc:Q07098]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.